DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
VTPSPT
Uniprot ID:
Q9BZB8
Source protein:
Cytoplasmic polyadenylation element-binding protein 1
Source gene:
CPEB1
Class:
DEG_SCF_FBW7_1
Location:
243:248
E3 ligase:
FBXW7
DEGRON score:
0.9895
ASA_SCORE:
78.2
COIL:
0.9067
CONS_SCORE:
0.3482
DSS_SCORE:
0.5475
HELIX:
0.0703
FCONS_SCORE:
1.1208
RIG_SCORE:
0.6791
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.A239D
TCGA-AA-3984
COAD
TCGA
VTPSPT
DEG_SCF_FBW7_1
0.2222
p.L240F
TCGA-AP-A1DM
UCEC
TCGA
VTPSPT
DEG_SCF_FBW7_1
0.25
p.S249R
TCGA-C8-A138
BRCA
TCGA
VTPSPT
DEG_SCF_FBW7_1
0.3056
p.A250T
TCGA-EO-A22R
UCEC
TCGA
VTPSPT
DEG_SCF_FBW7_1
0.2778
p.L240I
TCGA-EO-A3B0
UCEC
TCGA
VTPSPT
DEG_SCF_FBW7_1
0.25
p.L240I
DO8264
COAD
ICGC
VTPSPT
DEG_SCF_FBW7_1
0.25
p.R253T
TCGA-IR-A3LK
CESC
TCGA
VTPSPT
DEG_SCF_FBW7_1
0.1944
p.V253G
DO1285
BRCA
ICGC
VTPSPT
DEG_SCF_FBW7_1
0.1944
p.P244S
DO8730
COAD
ICGC
VTPSPT
DEG_SCF_FBW7_1
0.6752
p.S235F
DO222884
COCA
ICGC
VTPSPT
DEG_SCF_FBW7_1
0.1111
p.W245R
DO230976
LUSC
ICGC
VTPSPT
DEG_SCF_FBW7_1
0.8634
p.W245R
DO224626
LUSC
ICGC
VTPSPT
DEG_SCF_FBW7_1
0.8634
p.D246Y
DO42608
UCEC
ICGC
VTPSPT
DEG_SCF_FBW7_1
0.7325
p.K237N
DO42825
UCEC
ICGC
VTPSPT
DEG_SCF_FBW7_1
0.1667
p.A242V
SIDM01951
Colorectal Carcinoma
GDSC
VTPSPT
DEG_SCF_FBW7_1
0.3056
p.A242V
SIDM00999
Bladder Carcinoma
GDSC
VTPSPT
DEG_SCF_FBW7_1
0.3056
p.A242V
639-V
urinary_tract
COSMIC
VTPSPT
DEG_SCF_FBW7_1
0.3056
p.D234N
SIDM01628
Non-Small Cell Lung Carcinoma
GDSC
VTPSPT
DEG_SCF_FBW7_1
0.0833
p.R233H
ACH-000952
Prostate Cancer
CCLE
VTPSPT
DEG_SCF_FBW7_1
0.0556
p.A245V
639-V
urinary_tract
COSMIC
VTPSPT
DEG_SCF_FBW7_1
0.6936
p.D245G
COR-L95
lung
COSMIC
VTPSPT
DEG_SCF_FBW7_1
0.7198
p.P234H
LN-18
central_nervous_system
COSMIC
VTPSPT
DEG_SCF_FBW7_1
0.0833
Drug responses associated with CPEB1 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of VTPSPT
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q92870
Amyloid beta precursor protein binding family B member 2
DEG_SCF_FBW7_1
338:343
VTPSPT
FBXW7
0.9883
More...
Q9BZB8
Cytoplasmic polyadenylation element-binding protein 1
DEG_SCF_FBW7_1
243:248
VTPSPT
FBXW7
0.9895
More...