DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
VTPTKE
Uniprot ID:
Q12889
Source protein:
Oviduct-specific glycoprotein
Source gene:
OVGP1
Class:
DEG_SCF_FBW7_2
Location:
451:456
E3 ligase:
FBXW7
DEGRON score:
0.8993
ASA_SCORE:
95.2
COIL:
0.805
CONS_SCORE:
0.6331
DSS_SCORE:
0.5709
HELIX:
0.0137
FCONS_SCORE:
1.0494
RIG_SCORE:
0.7762
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.S459F
TCGA-CV-A468
HNSC
TCGA
VTPTKE
DEG_SCF_FBW7_2
0.25
p.S459F
TCGA-D3-A3ML
SKCM
TCGA
VTPTKE
DEG_SCF_FBW7_2
0.25
p.S459F
TCGA-FW-A3R5
SKCM
TCGA
VTPTKE
DEG_SCF_FBW7_2
0.25
p.S459F
DO52070
HNSC
ICGC
VTPTKE
DEG_SCF_FBW7_2
0.25
p.S459F
DO37406
SKCM
ICGC
VTPTKE
DEG_SCF_FBW7_2
0.25
p.S459F
DO47413
SKCM
ICGC
VTPTKE
DEG_SCF_FBW7_2
0.25
p.S459F
ACH-001567
Skin Cancer
CCLE
VTPTKE
DEG_SCF_FBW7_2
0.25
p.T454A
TCGA-O2-A52W
LUSC
TCGA
VTPTKE
DEG_SCF_FBW7_2
0.6028
p.T454A
DO219225
LUSC
ICGC
VTPTKE
DEG_SCF_FBW7_2
0.6028
p.A466D
DO229031
LICA
ICGC
VTPTKE
DEG_SCF_FBW7_2
0.0556
p.T457I
DO23548
LIRI
ICGC
VTPTKE
DEG_SCF_FBW7_2
0.3056
p.N441K
SIDM01191
Osteosarcoma
GDSC
VTPTKE
DEG_SCF_FBW7_2
0.0556
p.N441K
ACH-000364
Primary
CCLE
VTPTKE
DEG_SCF_FBW7_2
0.0556
p.N441K
U-2-OS
bone
COSMIC
VTPTKE
DEG_SCF_FBW7_2
0.0556
Drug responses associated with OVGP1 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of VTPTKE
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q12889
Oviduct-specific glycoprotein
DEG_SCF_FBW7_2
451:456
VTPTKE
FBXW7
0.8993
More...
Q96T23
Remodeling and spacing factor 1
DEG_SCF_FBW7_2
407:412
VTPTKE
FBXW7
0.9704
More...