DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
VTPTKE
Uniprot ID:
Q96T23
Source protein:
Remodeling and spacing factor 1
Source gene:
RSF1
Class:
DEG_SCF_FBW7_2
Location:
407:412
E3 ligase:
FBXW7
DEGRON score:
0.9704
ASA_SCORE:
100.9667
COIL:
0.7492
CONS_SCORE:
0.3505
DSS_SCORE:
0.393
HELIX:
0.1722
FCONS_SCORE:
0.9314
RIG_SCORE:
0.7792
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.E417K
TCGA-EE-A29D
SKCM
TCGA
VTPTKE
DEG_SCF_FBW7_2
0.1944
p.D413H
DO228471
BRCA
ICGC
VTPTKE
DEG_SCF_FBW7_2
0.3056
p.K411N
DO4942
BRCA
ICGC
VTPTKE
DEG_SCF_FBW7_2
0.5806
p.T416I
DO38153
SKCM
ICGC
VTPTKE
DEG_SCF_FBW7_2
0.2222
p.S400N
DO38183
STAD
ICGC
VTPTKE
DEG_SCF_FBW7_2
0.25
p.D420E
DO41331
UCEC
ICGC
VTPTKE
DEG_SCF_FBW7_2
0.1111
Drug responses associated with RSF1 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of VTPTKE
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q12889
Oviduct-specific glycoprotein
DEG_SCF_FBW7_2
451:456
VTPTKE
FBXW7
0.8993
More...
Q96T23
Remodeling and spacing factor 1
DEG_SCF_FBW7_2
407:412
VTPTKE
FBXW7
0.9704
More...