DegronMD: protein-targeted degradation, mutation and drug response to degrons
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CGC
Degron:
VVVHKE
Uniprot ID:
O43491
Source protein:
Band 4.1-like protein 2
Source gene:
EPB41L2
Class:
LIG_APCC_ABBA_1
Location:
991:996
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.988
ASA_SCORE:
75.7167
COIL:
0.1392
CONS_SCORE:
0.5629
DSS_SCORE:
0.5797
HELIX:
0.0085
FCONS_SCORE:
1.2586
RIG_SCORE:
0.7852
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.E996Q
TCGA-EA-A3HU
CESC
TCGA
VVVHKE
LIG_APCC_ABBA_1
0.6744
p.E996Q
DO6320
CESC
ICGC
VVVHKE
LIG_APCC_ABBA_1
0.6744
p.H994R
TCGA-G3-A5SK
LIHC
TCGA
VVVHKE
LIG_APCC_ABBA_1
0.8244
p.H994R
DO45005
LIHC
ICGC
VVVHKE
LIG_APCC_ABBA_1
0.8244
p.E1002Q
TCGA-N9-A4Q7
UCS
TCGA
VVVHKE
LIG_APCC_ABBA_1
0.1667
p.E996A
DO222500
ESCA
ICGC
VVVHKE
LIG_APCC_ABBA_1
0.7701
p.S987L
DO228946
LICA
ICGC
VVVHKE
LIG_APCC_ABBA_1
0.6667
p.H983N
DO229038
LICA
ICGC
VVVHKE
LIG_APCC_ABBA_1
0.1111
p.E998Q
DO230993
LUSC
ICGC
VVVHKE
LIG_APCC_ABBA_1
0.2778
p.E998Q
DO230990
LUSC
ICGC
VVVHKE
LIG_APCC_ABBA_1
0.2778
p.E981G
DO230451
UTCA
ICGC
VVVHKE
LIG_APCC_ABBA_1
0.0556
p.E1001D
SIDM00976
Melanoma
GDSC
VVVHKE
LIG_APCC_ABBA_1
0.1944
p.E1001D
WM1552C
skin
COSMIC
VVVHKE
LIG_APCC_ABBA_1
0.1944
Drug responses associated with EPB41L2 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of VVVHKE
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
O43491
Band 4.1-like protein 2
LIG_APCC_ABBA_1
991:996
VVVHKE
APC,CDC20,FZR1
0.988
More...
Q9Y2J2
Band 4.1-like protein 3
LIG_APCC_ABBA_1
1072:1077
VVVHKE
APC,CDC20,FZR1
0.986
More...