DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
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CGC
Degron:
VVVHKE
Uniprot ID:
Q9Y2J2
Source protein:
Band 4.1-like protein 3
Source gene:
EPB41L3
Class:
LIG_APCC_ABBA_1
Location:
1072:1077
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.986
ASA_SCORE:
70.7
COIL:
0.1738
CONS_SCORE:
0.6405
DSS_SCORE:
0.6081
HELIX:
0.007
FCONS_SCORE:
1.2952
RIG_SCORE:
0.7688
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.S1068T
TCGA-69-7980
LUAD
TCGA
VVVHKE
LIG_APCC_ABBA_1
0.6667
p.M1067I
TCGA-85-8580
LUSC
TCGA
VVVHKE
LIG_APCC_ABBA_1
0.1944
p.Q1063P
TCGA-B5-A5OC
UCEC
TCGA
VVVHKE
LIG_APCC_ABBA_1
0.0833
p.E1079D
TCGA-BA-A4II
HNSC
TCGA
VVVHKE
LIG_APCC_ABBA_1
0.2778
p.E1079D
TCGA-BR-8368
STAD
TCGA
VVVHKE
LIG_APCC_ABBA_1
0.2778
p.S1068L
TCGA-GC-A3I6
BLCA
TCGA
VVVHKE
LIG_APCC_ABBA_1
0.6667
p.H1064N
TCGA-NC-A5HR
LUSC
TCGA
VVVHKE
LIG_APCC_ABBA_1
0.1111
Drug responses associated with EPB41L3 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of VVVHKE
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
O43491
Band 4.1-like protein 2
LIG_APCC_ABBA_1
991:996
VVVHKE
APC,CDC20,FZR1
0.988
More...
Q9Y2J2
Band 4.1-like protein 3
LIG_APCC_ABBA_1
1072:1077
VVVHKE
APC,CDC20,FZR1
0.986
More...