Gene: Gabrb3

Basic information

Tag Content
Uniprot ID A0A0G2K0J9
Entrez ID
Genbank protein ID
Genbank nucleotide ID
Ensembl protein ID ENSRNOP00000071478
Ensembl nucleotide ID ENSRNOG00000060599
Gene name Gamma-aminobutyric acid receptor subunit beta-3
Gene symbol Gabrb3
Organism Rattus norvegicus
NCBI taxa ID 10116
Cleft type
Developmental stage
Data sources Homology search
Reference
Functional description
Sequence
APPLGARGAA WHDPGNMSFV KETVDKLLKG YDIRLRPDFG GPPVCVGMNI DIASIDMVSE 60
VNMDYTLTMY FQQYWRDKRL AYSGIPLNLT LDNRVADQLW VPDTYFLNDK KSFVHGVTVK 120
NRMIRLHPDG TVLYGLRITT TAACMMDLRR YPLDEQNCTL EIESYGYTTD DIEFYWRGGD 180
KAVTGVERIE LPQFSIVEHR LVSRNVVFAT GAYPRLSLSF RLKRNIGYFI LQTYMPSILI 240
TILSWVSFWI NYDASAARVA LGITTVLTMT TINTHLRETL PKIPYVKAID MYLMGCFVFV 300
FLALLEYAFV NYIFFGRGPQ RQKKLAEKTA KAKNDRSKSE INRVDAHGNI LLAPMDVHNE 360
MNEVAGSVGD TRNSAISFDN SGIQYRKQSM PKEGHGRYMG DRSIPHKKTH LRRRSSQLKI 420
KIPDLTDVNA IDRWSRIVFP FTFSLFNLVY WLYYVN 456

Abbreviation :
CLO : cleft lip only. CPO : cleft palate only. CLP : cleft lip and palate. CL/P : cleft lip with/without cleft palate.
For humans: CL/P, CLO, CPO, and CLP. For mice: CLO, CLP, and CPO.

Protein disorder information

Orthologous information

Relation Gene symbol Entrez ID UniProt ID Cleft type Developmental stage Species Evidence Details
1:1 orthologGABRB3A0A452FJH3Capra hircusPredictionMore>>
1:1 orthologGABRB32562P28472CL/PHomo sapiensPublicationMore>>
1:1 orthologGabrb314402P63080CPOMus musculusPublicationMore>>
1:1 orthologGABRB3453265A0A2I3THQ1Pan troglodytesPredictionMore>>
1:1 orthologA0A4X1UB00Sus scrofaPredictionMore>>
1:1 orthologGabrb3A0A0G2K0J9Rattus norvegicusPredictionMore>>

Gene ontology

GO ID GO Term
GO:1902711 GABA-A receptor complex
GO:0098982 GABA-ergic synapse
GO:0005887 integral component of plasma membrane
GO:0098794 postsynapse
GO:0004890 GABA-A receptor activity
GO:0022851 GABA-gated chloride ion channel activity
GO:0042802 identical protein binding
GO:1904315 transmitter-gated ion channel activity involved in regulation of postsynaptic membrane potential
GO:0071420 cellular response to histamine
GO:0090102 cochlea development
GO:0007214 gamma-aminobutyric acid signaling pathway
GO:0060080 inhibitory postsynaptic potential
GO:1904862 inhibitory synapse assembly
GO:0060119 inner ear receptor cell development
GO:0060384 innervation
GO:0043524 negative regulation of neuron apoptotic process
GO:0060021 roof of mouth development
GO:0007605 sensory perception of sound

Functional annotations

Keywords

Keyword ID Keyword Term
KW-1003 Cell membrane
KW-1015 Disulfide bond
KW-0407 Ion channel
KW-0406 Ion transport
KW-0472 Membrane
KW-1185 Reference proteome
KW-0812 Transmembrane
KW-1133 Transmembrane helix
KW-0813 Transport

Interpro

InterPro ID InterPro Term
IPR006028 GABAA/Glycine_rcpt
IPR002289 GABAAb_rcpt
IPR006202 Neur_chan_lig-bd
IPR036734 Neur_chan_lig-bd_sf
IPR006201 Neur_channel
IPR036719 Neuro-gated_channel_TM_sf
IPR006029 Neurotrans-gated_channel_TM
IPR018000 Neurotransmitter_ion_chnl_CS

PROSITE

PROSITE ID PROSITE Term
PS00236 NEUROTR_ION_CHANNEL

Pfam

Pfam ID Pfam Term
PF02931 Neur_chan_LBD
PF02932 Neur_chan_memb