| Tag | Content |
|---|---|
| Uniprot ID | A0A287AMW5; A0A286ZRY6; |
| Entrez ID | |
| Genbank protein ID | HDC11715.1 |
| Genbank nucleotide ID | |
| Ensembl protein ID | ENSSSCP00000045247 |
| Ensembl nucleotide ID | ENSSSCG00000001061 |
| Gene name | Jumonji and AT-rich interaction domain containing 2 |
| Gene symbol | JARID2 |
| Organism | Sus scrofa |
| NCBI taxa ID | 9823 |
| Cleft type | |
| Developmental stage | |
| Data sources | Homology search |
| Reference | |
| Functional description | |
| Sequence | MSKERPKRNI IQKKYDDSDG IPWSEERVVR KVLYLSLKEF KNAQKRQHGE GIPGSLKTVN 60 GLLGNGQSKG LGPASEQSEN EKDDASQVSS TSNDVSSSDF EEGPSRKRPR LQAQRKFAQS 120 QPNSPSTTPV KIVEPLLPPP ATQISDLSKR KPKTEDFLTF LCLRGSPALP NSMVYFGSSQ 180 DEEDVEEEDD ETEDVKTAAN NASSSCQSTP RKGKTHKHVH NGHVFNGSSR SSREKEPVQK 240 HKSKEATPAK EKHSDPRADG RREQASASHP PAAPSTGSSA KGLAANHHHP PLHRSAQDLR 300 KQVSKVNGVT RMSSLGTSAT SAKKMREVRP SPSKTVKYTA TVTKGTVTYT KAKRELVKET 360 KPNHHKPSSA VNHTISGKTE SSNAKTRKQV LSLGGASKST GHAVNGLKVS GRLNPKSCTK 420 EVGGRQLREG LRNSKRRLEE APPADKPQSP PKKMKGAAGA AEGPGRKPAS AQAPAPAPAP 480 APAEKAPPGG HVKKEVPERS LERNRPKRAA AGKGPPGRQA HSKPDAPCEH RSTSQSEPLP 540 RPHEAAAKAE KGAGRAGWAA MDEIPVLRPS AKEFHDPLVY IESVRPQVEK YGMCRVIPPP 600 DWRPECKLND EMRFVTQIQH IHKLGRRWGP NVQRLACIKK HLRSQGITMD ELPLIGGCEL 660 DLACFFRLIN EMGGMQQVTD LKKWNKLADM LRIPKTAQDR LAKLQEAYCQ YLLSYDSLSP 720 EEHRRLEKEV LMEKESLERR KGPLEGHTEQ DYNRFHPLPR FEPKNGLING VAHRNGFRSK 780 LKEVGPAQLK TGRRRLFAQE KEVAKEEEED KGILSDFHKC IYKGRSVSLT TFYRTARNIM 840 NMCFSKEPAP AEIEQEYWRL VEEKDCHVAV HCGKVDTNTH GSGFPVGKSE PFSRHGWNLT 900 VLPNNTGSIL RHLGAVPGVT IPWLNIGMVF STSCWSRDQN HLPYIDYLHT GADCIWYCIP 960 AEEENKLEDV VHTLLQANGT PGLQMLESNV MISPEVLCRE GVKVHRAVQQ SGQFVVCFPG 1020 SFVSKVCCGY SVSETVHFAT TQWTSMGFET AKEMKRRHIA KPFSMEKLLY QIAQAEAKKE 1080 NGPTLSTISA LLDELRDTEL RQRRQLFEAG LHSSARYGSH DGGSAAPDGK KKPRKWLQLE 1140 TSERRCQVCQ HLCYLSMVVQ ENENVVFCLE CALRHVEKQK SCRGLKLMYR YDEEQIISLV 1200 NQICGKVSGK NGSIENCLGK PTPKRGPRKR ATVDVPPSRL APSSS 1245 |
Abbreviation :
CLO : cleft lip only. CPO : cleft palate only.
CLP : cleft lip and palate. CL/P : cleft lip with/without cleft palate.
For humans: CL/P, CLO, CPO, and CLP. For mice: CLO, CLP, and CPO.
| Relation | Gene symbol | Entrez ID | UniProt ID | Cleft type | Developmental stage | Species | Evidence | Details |
|---|---|---|---|---|---|---|---|---|
| 1:1 ortholog | JARID2 | 478729 | A0A5F4DE24 | Canis lupus familiaris | Prediction | More>> | ||
| 1:1 ortholog | JARID2 | 102184681 | A0A452DTS6 | Capra hircus | Prediction | More>> | ||
| 1:1 ortholog | JARID2 | 3720 | Q92833 | CPO,CL/P | Homo sapiens | Publication | More>> | |
| 1:1 ortholog | Jarid2 | G3UZT8 | E14.5, E15.5 | Mus musculus | Prediction | More>> | ||
| 1:1 ortholog | JARID2 | 462450 | A0A2I3SRS8 | Pan troglodytes | Prediction | More>> | ||
| 1:1 ortholog | JARID2 | A0A287AMW5 | Sus scrofa | Prediction | More>> | |||
| 1:1 ortholog | Jarid2 | 681740 | M0RBV7 | Rattus norvegicus | Prediction | More>> |
| GO ID | GO Term |
|---|---|
| GO:0035098 | ESC/E(Z) complex |
| GO:0005739 | mitochondrion |
| GO:0003682 | chromatin binding |
| GO:0001227 | DNA-binding transcription repressor activity, RNA polymerase II-specific |
| GO:0000977 | RNA polymerase II regulatory region sequence-specific DNA binding |
| GO:0008134 | transcription factor binding |
| GO:1990830 | cellular response to leukemia inhibitory factor |
| GO:0001889 | liver development |
| GO:0008285 | negative regulation of cell population proliferation |
| GO:0031061 | negative regulation of histone methylation |
| GO:0051574 | positive regulation of histone H3-K9 methylation |
| GO:0048536 | spleen development |
| GO:0048863 | stem cell differentiation |
| GO:0048538 | thymus development |