| Tag | Content |
|---|---|
| Uniprot ID | G3UZT8 |
| Entrez ID | |
| Genbank protein ID | |
| Genbank nucleotide ID | |
| Ensembl protein ID | ENSMUSP00000134630 |
| Ensembl nucleotide ID | ENSMUSG00000038518 |
| Gene name | Protein Jumonji |
| Gene symbol | Jarid2 |
| Organism | Mus musculus |
| NCBI taxa ID | 10090 |
| Cleft type | |
| Developmental stage | E14.5, E15.5 |
| Data sources | Homology search |
| Reference | |
| Functional description | |
| Sequence | MAAPRVCQVQ FLVAYLEEPG IEGLLGNAQA KALGPASEQS ENEKDDASQV SSTSNDVSSS 60 DFEEGPSRKR PRLQAQRKFA QSQPNSPSTT PVKIVEPLLP PPATQISDLS KRKPKTEDFL 120 TFLCLRGSPA LPNSMVYFGS SQDEEDVEEE DDETEDVKAT TNNASSSCQS TPRKGKTHKH 180 VHNGHVFNGS SRSAREKEPA HKHRSKEATP GKEKHSEPRA DSRREQASGA QPTAASAAAS 240 SAKGLAANHQ PPPSHRSAQD LRKQVSKVNG VTRMSSLGAG TNSAKKIREV RPSPSKTVKY 300 TATVTKGTVT YTKAKRELVK ETKPNHHKPS SAVNHTISGK TESSNAKTRK QVLSLGGASK 360 STGPAASGLK ASSRLNPKSC TKEVGGRQLR EGLRNSKRRL EEAQQVDKPQ SPPKKMKGVA 420 GNAEAPGKKA SAASGEKSLL NGHVKKEVPE RSLERNRPKR AAAGKNMLGK QAHGKTEGTP 480 CENRSTSQPE SSHKPHDPQG KPEKGSGKSG WAAMDEIPVL RPSAKEFHDP LIYIESVRAQ 540 VEKYGMCRVI PPPDWRPECK LNDEMRFVTQ IQHIHKLGRR WGPNVQRLAC IKKHLRSQGI 600 TMDELPLIGG CELDLACFFR LINEMGGMQQ VTDLKKWNKL ADMLRIPKTA QDRLAKLQEA 660 YCQYLLSYDS LSPEEHRRLE KEVLMEKEIL EKRKGPLEGH TESDHHKFHS LPRFEPKNGL 720 VHGVTPRNGF RSKLKEVGRA PLKTGRRRLF AQEKEVVKEE EEDKGVLNDF HKCIYKGRSV 780 SLTTFYRTAR NIMNMCFSKE PAPAEIEQEY WRLVEEKDCH VAVHCGKVDT NTHGSGFPVG 840 KSEPFSRHGW NLTVLPNNTG SILRHLGAVP GVTIPWLNIG MVFSTSCWSR DQNHLPYIDY 900 LHTGADCIWY CIPAEEENKL EDVVHTLLQG NGTPGLQMLE SNVMISPEVL CKKGIKVHRT 960 VQQSGQFVVC FPGSFVSKVC CGYNVSETVH FATTQWTSMG FETAKEMKRR HIAKPFSMEK 1020 LLYQIAQAE 1029 |
Abbreviation :
CLO : cleft lip only. CPO : cleft palate only.
CLP : cleft lip and palate. CL/P : cleft lip with/without cleft palate.
For humans: CL/P, CLO, CPO, and CLP. For mice: CLO, CLP, and CPO.
| Relation | Gene symbol | Entrez ID | UniProt ID | Cleft type | Developmental stage | Species | Evidence | Details |
|---|---|---|---|---|---|---|---|---|
| 1:1 ortholog | JARID2 | 478729 | A0A5F4DE24 | Canis lupus familiaris | Prediction | More>> | ||
| 1:1 ortholog | JARID2 | 102184681 | A0A452DTS6 | Capra hircus | Prediction | More>> | ||
| 1:1 ortholog | JARID2 | 3720 | Q92833 | CPO,CL/P | Homo sapiens | Publication | More>> | |
| 1:1 ortholog | Jarid2 | G3UZT8 | E14.5, E15.5 | Mus musculus | Prediction | More>> | ||
| 1:1 ortholog | JARID2 | 462450 | A0A2I3SRS8 | Pan troglodytes | Prediction | More>> | ||
| 1:1 ortholog | JARID2 | A0A287AMW5 | Sus scrofa | Prediction | More>> | |||
| 1:1 ortholog | Jarid2 | 681740 | M0RBV7 | Rattus norvegicus | Prediction | More>> |
| Gene symbol | Significant Variants/SNPS | Methods | PubMed ID |
|---|---|---|---|
| JARID2 | rs2237138T>C | Genotyping -SNaPshot minisequencing technique. | 25155265 |
| JARID2 | rs2072820T>C | Linkage disequilibrium study | 20506229 |
| JARID2 | rs2237149C>A | Linkage disequilibrium study | 20506229 |
| JARID2 | rs2299043G>A | Linkage disequilibrium study | 20506229 |
| JARID2 | rs2237138T>C | Linkage disequilibrium study | 20506229 |
| JARID2 | rs2076056C>G | Linkage disequilibrium study | 20506229 |
| JARID2 | rs2282819G>A | Linkage disequilibrium study | 20506229 |
| GO ID | GO Term | Evidence |
|---|
| GO ID | GO Term | Evidence |
|---|
| GO ID | GO Term | Evidence |
|---|
| Reactome ID | Reactome Term | Evidence |
|---|