Gene: ABCB1

Basic information

Tag Content
Uniprot ID A0A2I3RUL7
Entrez ID
Genbank protein ID
Genbank nucleotide ID
Ensembl protein ID ENSPTRP00000068017
Ensembl nucleotide ID ENSPTRG00000019369
Gene name ATP binding cassette subfamily B member 1
Gene symbol ABCB1
Organism Pan troglodytes
NCBI taxa ID 9598
Cleft type
Developmental stage
Data sources Homology search
Reference
Functional description
Sequence
MDLEGDRNGG FRYSNWLDKL YMVVGTLAAI IHGAGLPLMM LVFGEMTDIF ANAGNLEDLM 60
SNITNRSDIN DTGFFMNLEE DMTRYAYYYS GIGAGVLVAA YIQVSFWCLA AGRQIHKIRK 120
QFFHAIMRQE IGWFDVHDVG ELNTRLTDDV SKINEGIGDK IGMFFQSMAT FFTGFIVGFT 180
RGWKLTLVIL AISPVLGLSA AVWAKILSSF TDKELLAYAK AGAVAEEVLA AIRTVIAFGG 240
QKKELERYNK NLEEAKRIGI KKAITANISI GAAFLLIYAS YALAFWYGTT LVLSGEYSIG 300
QVLTVFFSVL IGAFSVGQAS PSIEAFANAR GAAYEIFKII DNKPSIDSYS KSGHKPDNIK 360
GNLEFRNVHF SYPSRKQVKI LKGLNLKVQS GQTVALVGNS GCGKSTTVQL MQRLYDPTEG 420
MVSVDGQDIR TINVRFLREI IGVVSQEPVL FATTIAENIR YGRENVTMDE IEKAVKEANA 480
YDFIMKLPHK FDTLVGERGA QLSGGQKQRI AIARALVRNP KILLLDEATS ALDTESEAVV 540
QVALDKARKG RTTIVIAHRL STVRNADVIA GFDDGVIVEK GNHDELMKEK GIYFKLVTMQ 600
TAGNEVELEN AADESKSEID ALEMSSNDSR SSLIRKRSTR RSVRGSQAQD RKLSTKEALD 660
ESIPPVSFWR IMKLNLTEWP YFVVGVFCAI INGGLQPAFA IIFSKIIGVF TRIDDPETKR 720
QNSNLFSLLF LVLGIISFIT FFLQGFTFGK AGEILTKRLR YMVFRSMLRQ DVSWFDDPKN 780
TTGALTTRLA NDAAQVKGAI GSRLAVITQN IANLGTGIII SFIYGWQLTL LLLAIVPIIA 840
IAGVVEMKML SGQALKDKKE LEGAGKIASE AIENFRTVVS LTQEQKFEHM YAQSLQVPYR 900
NSLRKAHIFG ITFSFTQAMM YFSYAGCFRF GAYLVAHKLM SFEDVLLVFS AVVFGAMAVG 960
QVSSFAPDYA KAKISAAHII MIIEKTPLID SYSTEGLTPN TLEGNVTFGE VVFNYPTRPD 1020
IPVLQGLSLE VKKGQTLALV GSSGCGKSTV VQLLERFYDP LAGKVLLDGK EIKRLNVQWL 1080
RAHLGIVSQE PILFDCSIAE NIAYGDNSRV VSQEEIVRAA KEANIHAFIE SLPNKYSTRV 1140
GDKGTQLSGG QKQRIAIARA LVRQPHILLL DEATSALDTE SEKVVQEALD KAREGRTCIV 1200
IAHRLSTIQN ADLIVVFQNG RVKEHGTHQQ LLAQKGIYFS MVSVQAGTKR Q 1251

Abbreviation :
CLO : cleft lip only. CPO : cleft palate only. CLP : cleft lip and palate. CL/P : cleft lip with/without cleft palate.
For humans: CL/P, CLO, CPO, and CLP. For mice: CLO, CLP, and CPO.

Protein disorder information

Orthologous information

Relation Gene symbol Entrez ID UniProt ID Cleft type Developmental stage Species Evidence Details
1:1 orthologABCB1403879Q4PLA8Canis lupus familiarisPredictionMore>>
1:1 orthologABCB15243P08183Homo sapiensPublicationMore>>
1:1 orthologAbcb1a18671P21447Mus musculusPredictionMore>>
1:1 orthologABCB1A0A2I3RUL7Pan troglodytesPredictionMore>>
1:1 orthologABCB1100008914G1T8H8Oryctolagus cuniculusPredictionMore>>

Gene ontology

GO ID GO Term
GO:0016021 integral component of membrane
GO:0005524 ATP binding
GO:0016887 ATPase activity
GO:0042626 ATPase-coupled transmembrane transporter activity

Functional annotations

Keywords

Keyword ID Keyword Term
KW-0067 ATP-binding
KW-0175 Coiled coil
KW-0472 Membrane
KW-0547 Nucleotide-binding
KW-1185 Reference proteome
KW-0812 Transmembrane
KW-1133 Transmembrane helix

Interpro

InterPro ID InterPro Term
IPR003593 AAA+_ATPase
IPR011527 ABC1_TM_dom
IPR036640 ABC1_TM_sf
IPR003439 ABC_transporter-like
IPR017871 ABC_transporter_CS
IPR030258 MDR1
IPR027417 P-loop_NTPase
IPR039421 Type_I_exporter

PROSITE

PROSITE ID PROSITE Term
PS50929 ABC_TM1F
PS00211 ABC_TRANSPORTER_1
PS50893 ABC_TRANSPORTER_2

Pfam

Pfam ID Pfam Term
PF00664 ABC_membrane
PF00005 ABC_tran