Gene: ABCB1

Basic information

Tag Content
Uniprot ID Q4PLA8; F1PH01;
Entrez ID 403879
Genbank protein ID AAY67840.1
Genbank nucleotide ID NM_001003215.2; XM_014118874.1; XM_014118873.1;
Ensembl protein ID ENSCAFP00000002684
Ensembl nucleotide ID ENSCAFG00000001835
Gene name ATP binding cassette subfamily B member 1
Gene symbol ABCB1
Organism Canis lupus familiaris
NCBI taxa ID 9615
Cleft type
Developmental stage
Data sources Homology search
Reference
Functional description
Sequence
MDPEGGRKGS AEKNFWKMGK KSKKNEKKEK KPTVSTFAMF RYSNWLDRLY MLVGTMAAII 60
HGAALPLMML VFGNMTDSFA NAGISRNKTF PVIINESITN NTQHFINHLE EEMTTYAYYY 120
SGIGAGVLVA AYIQVSFWCL AAGRQILKIR KQFFHAIMRQ EIGWFDVHDV GELNTRLTDD 180
VSKINEGIGD KIGMFFQSIA TFFTGFIVGF TRGWKLTLVI LAISPVLGLS AAIWAKILSS 240
FTDKELLAYA KAGAVAEEVL AAIRTVIAFG GQKKELERYN KNLEEAKRIG IKKAITANIS 300
IGAAFLLIYA SYALAFWYGT SLVLSSEYSI GQVLTVFFSV LIGAFSIGQA SPSIEAFANA 360
RGAAYEIFKI IDNKPSIDSY SKSGHKPDNI KGNLEFKNVH FSYPSRKEVK ILKGLNLKVQ 420
SGQTVALVGN SGCGKSTTVQ LMQRLYDPTD GMVCIDGQDI RTINVRHLRE ITGVVSQEPV 480
LFATTIAENI RYGRENVTMD EIEKAVKEAN AYDFIMKLPN KFDTLVGERG AQLSGGQKQR 540
IAIARALVRN PKILLLDEAT SALDTESEAV VQVALDKARK GRTTIVIAHR LSTVRNADVI 600
AGFDDGVIVE KGNHDELMKE KGIYFKLVTM QTRGNEIELE NATGESKSES DALEMSPKDS 660
GSSLIKRRST RRSIHAPQGQ DRKLGTKEDL NENVPPVSFW RILKLNSTEW PYFVVGIFCA 720
IINGGLQPAF SIIFSRIIGI FTRDEDPETK RQNSNMFSVL FLVLGIISFI TFFLQGFTFG 780
KAGEILTKRL RYMVFRSMLR QDVSWFDDPK NTTGALTTRL ANDAAQVKGA IGSRLAVITQ 840
NIANLGTGII ISLIYGWQLT LLLLAIVPII AIAGVVEMKM LSGQALKDKK ELEGAGKIAT 900
EAIENFRTVV SLTREQKFEY MYAQSLQVPY RNSLRKAHIF GVSFSITQAM MYFSYAGCFR 960
FGAYLVANEF MNFQDVLLVF SAIVFGAMAV GQVSSFAPDY AKAKVSAAHV IMIIEKSPLI 1020
DSYSPHGLKP NTLEGNVTFN EVVFNYPTRP DIPVLQGLSL EVKKGQTLAL VGSSGCGKST 1080
VVQLLERFYD PLAGSVLIDG KEIKHLNVQW LRAHLGIVSQ EPILFDCSIA ENIAYGDNSR 1140
VVSHEEIMQA AKEANIHHFI ETLPEKYNTR VGDKGTQLSG GQKQRIAIAR ALVRQPHILL 1200
LDEATSALDT ESEKVVQEAL DKAREGRTCI VIAHRLSTIQ NADLIVVFQN GKVKEHGTHQ 1260
QLLAQKGIYF SMVSVQAGAK R 1281

Abbreviation :
CLO : cleft lip only. CPO : cleft palate only. CLP : cleft lip and palate. CL/P : cleft lip with/without cleft palate.
For humans: CL/P, CLO, CPO, and CLP. For mice: CLO, CLP, and CPO.

Protein disorder information

Orthologous information

Relation Gene symbol Entrez ID UniProt ID Cleft type Developmental stage Species Evidence Details
1:1 orthologABCB1403879Q4PLA8Canis lupus familiarisPredictionMore>>
1:1 orthologABCB15243P08183Homo sapiensPublicationMore>>
1:1 orthologAbcb1a18671P21447Mus musculusPredictionMore>>
1:1 orthologABCB1A0A2I3RUL7Pan troglodytesPredictionMore>>
1:1 orthologABCB1100008914G1T8H8Oryctolagus cuniculusPredictionMore>>

Gene ontology

GO ID GO Term
GO:0016324 apical plasma membrane
GO:0009986 cell surface
GO:0016021 integral component of membrane
GO:0005886 plasma membrane
GO:0005524 ATP binding
GO:0016887 ATPase activity
GO:0042626 ATPase-coupled transmembrane transporter activity
GO:0099038 ceramide floppase activity
GO:0015562 efflux transmembrane transporter activity
GO:0090554 phosphatidylcholine floppase activity
GO:0090555 phosphatidylethanolamine flippase activity
GO:0031625 ubiquitin protein ligase binding
GO:0042910 xenobiotic transmembrane transporter activity
GO:0099040 ceramide translocation
GO:0140115 export across plasma membrane
GO:0000086 G2/M transition of mitotic cell cycle
GO:0045332 phospholipid translocation
GO:1901529 positive regulation of anion channel activity
GO:2001225 regulation of chloride transport
GO:0047484 regulation of response to osmotic stress
GO:0072089 stem cell proliferation
GO:0070633 transepithelial transport

Functional annotations

Keywords

Keyword ID Keyword Term
KW-0067 ATP-binding
KW-0175 Coiled coil
KW-0472 Membrane
KW-0547 Nucleotide-binding
KW-1185 Reference proteome
KW-0812 Transmembrane
KW-1133 Transmembrane helix

Interpro

InterPro ID InterPro Term
IPR003593 AAA+_ATPase
IPR011527 ABC1_TM_dom
IPR036640 ABC1_TM_sf
IPR003439 ABC_transporter-like
IPR017871 ABC_transporter_CS
IPR030258 MDR1
IPR027417 P-loop_NTPase
IPR039421 Type_I_exporter

PROSITE

PROSITE ID PROSITE Term
PS50929 ABC_TM1F
PS00211 ABC_TRANSPORTER_1
PS50893 ABC_TRANSPORTER_2

Pfam

Pfam ID Pfam Term
PF00664 ABC_membrane
PF00005 ABC_tran