Gene: IFT172

Basic information

Tag Content
Uniprot ID A0A452EH68
Entrez ID
Genbank protein ID
Genbank nucleotide ID
Ensembl protein ID ENSCHIP00000011313
Ensembl nucleotide ID ENSCHIG00000013288
Gene name Uncharacterized protein
Gene symbol IFT172
Organism Capra hircus
NCBI taxa ID 9925
Cleft type
Developmental stage
Data sources Homology search
Reference
Functional description
Sequence
MQLKHLRTLL SPQDGAAKVT CMAWSQNNAK FAVCTVDRVV LLYDEHGERR DKFSTKPADM 60
KYGRKSYMVK GMAFSPDSTK IAIGQTDNII YVYKIGEDWL ILFILAFFQS AVTCLQWPAE 120
YIIVFGLAEG KVRLANTKTN KSSTIYGTDS YVVSLTTNCS GKGILSGHAD GTIVRYFFDD 180
EGSGESQGKL VNHPCPPYAL AWATNSIVAA GCDRRIVAYG KEGHVLQTFD YSRDPLEREF 240
TTAAASPGGQ SVVLGSYDRL RVLNWSPRRN VWEEAKPKEI ANLYTITALA WKRDGSRLCA 300
GTLCGGVEQF DCCLRRSIYK NKFELTYVGP SQVIVKNLSS GTRVVLKSHY GYEVEEVKIL 360
GKERYLVAHT SDTLLLGDLT TNRLSEVAWQ GSGGNEKYFF ENENVCMIFN AGELTLVEYG 420
SNDTLGSVRT EFMNPHLISV RINERRQRGM EDNKKLAYLV DIKTIAIVDL IGGYNIGTIS 480
HESRVDWLEL NETGHKLLFR DRKLRLHLYD IESCSKTMIL NFCSYVQWVP GSDVLVAQNR 540
NNLCVWYNIE APERVTTSSI RGDVVGLERG GGKTEVMVTE GVTTVAYTLD EGLIEFGTAI 600
DDGNYTRATA FLETLEMTPE TEAMWKTLSK LSLEAKQLHI AERCFSALGH VAKARFLHET 660
NEIADQVSQE YGGEGTDFYQ VRARLAMLEK NYKLAEMIFL EQNAVEEAMD MYQELHRWDE 720
CIAVAEAKGH PALEKLRRGY YQWLMDTQQE ERAGELQESQ GDGLAAISLY LKAGLPAKAA 780
RLVLNREELL ANTELVEHIT AALIKGELYE RAGDLFEKIR NPQRALECYC KGSAFMKAVE 840
LARLAFPVEV VRLEEAWGDH LVQQKQLDAA INHYIEARCS IKAIEAALGA RQWKKAIYIL 900
DLQDQNTASK YYPRVAQHYA SLQEYEIAEE LYAKGDRTKD AIDMYTQAGR WEQAHKLAMK 960
CMRPEDVSVL YITQAQEMEK QGKYREAERL YVTVEEPDLA ISMFKKHKLY DDMIRLVGKH 1020
HPDLLSDTHL HLGKELEAEG RLQEAEYHYL EAQEWKATVN MYRSNGLWEE AYRVAKAHGG 1080
ANAHKHVAYL WAKSLGGEAA VRLLNKLGLL EAAIDHAADN CSFEFAFELS RLALKHKTPE 1140
IHLRYAMYLE DEGKFEEAEA EFIKAGKPKE AVLMFVHNQD WEAAQRVAEA HDPDSVAEVL 1200
VGQARGALEE KDFQKAEGLL LRAQRPGLAL NYYKEAGLWS DALRICKDYV PSQLEALQEE 1260
YEREATKKGA RGMEGLVEQA RQWEQAGEYS RAVDCYLKVR DAGSSSLVEK CWLKAAELSI 1320
KFLPPPRSLE VVRAVGPQLI GIGKPSAAAE LYLNLDLVKE AIDAFIEGEE WNKAKRVAKE 1380
LDPRYEDYVD QCYKQFLKSQ GKVDSLVGVD VVAALDLYVE QGQWDKCIET ATKQNYKILH 1440
KYVALYATHL IREGGYAQAL ALYVQHGAPA NPQNFNIYKR IFTDMVSSPG TNSAEAYHSW 1500
ADLRDVLFNL CENLVKSSEA NSPAHEEFET MLLIAHYYAT RSAAQSVKEL ETVAARLSVS 1560
LLRHTQLLPA DKAFYEAGIA AKAVGWENMA FIFLNRFLDL TDAIEEGTLD ALDHSDFQDT 1620
DIPFEVPLPA KQHVPEAQRE EVRDWVLTVS MDQRLEQVLP RDERGAYEAS LVAASTGVRA 1680
LPCLITGYPI LRNKIEFKRP GKAANKKNWN KFLMAIKTSH SPMCQDVLKF ISQWCGGLPS 1740
TSFSFQ 1746

Abbreviation :
CLO : cleft lip only. CPO : cleft palate only. CLP : cleft lip and palate. CL/P : cleft lip with/without cleft palate.
For humans: CL/P, CLO, CPO, and CLP. For mice: CLO, CLP, and CPO.

Protein disorder information

Orthologous information

Relation Gene symbol Entrez ID UniProt ID Cleft type Developmental stage Species Evidence Details
1:1 orthologIFT172483013E2RF25Canis lupus familiarisPredictionMore>>
1:1 orthologIFT172A0A452EH68Capra hircusPredictionMore>>
1:1 orthologIFT17226160Q9UG01Homo sapiensPredictionMore>>
1:1 orthologIft17267661Q6VH22CPOMus musculusPublicationMore>>
1:1 orthologIFT172459104K7B8Z3Pan troglodytesPredictionMore>>
1:1 orthologIFT172100348467G1SLK9Oryctolagus cuniculusPredictionMore>>
1:1 orthologift172432389Q5RHH4Danio rerioPredictionMore>>

Gene ontology

GO ID GO Term

Functional annotations

Keywords

Keyword ID Keyword Term
KW-1185 Reference proteome

Interpro

InterPro ID InterPro Term
IPR016024 ARM-type_fold
IPR011990 TPR-like_helical_dom_sf
IPR015943 WD40/YVTN_repeat-like_dom_sf
IPR001680 WD40_repeat
IPR036322 WD40_repeat_dom_sf

PROSITE

PROSITE ID PROSITE Term

Pfam

Pfam ID Pfam Term
PF00400 WD40