Gene: SIM2

Basic information

Tag Content
Uniprot ID A0A452FXM0
Entrez ID 102179422
Genbank protein ID
Genbank nucleotide ID XM_018052772.1
Ensembl protein ID ENSCHIP00000029175
Ensembl nucleotide ID ENSCHIG00000024392
Gene name Uncharacterized protein
Gene symbol SIM2
Organism Capra hircus
NCBI taxa ID 9925
Cleft type
Developmental stage
Data sources Homology search
Reference
Functional description
Sequence
MKEKSKNAAK TRREKENGEF YELAKLLPLP SAITSQLDKA SIIRLTTSYL KMRAVFPEGL 60
GDAWGQPSRA GPLDSVAKEL GSHLLQTLDG FVFVVASDGK IMYISETASV HLGLSQVELT 120
GNSIYEYIHP SDHDEMTAVL AAHQPLHHHL LQEYEIERSF FLRMKCVLAK RNAGLTCSGY 180
KVIHCSGYLK IRQYMLDMSL YDSCYQIVGL VAVGQSLPPS AITEIKLHSN MFMFRASLDL 240
KLIFLDSRVT ELTGYEPQDL IEKTLYHHVH GCDVFHLRYA HHLLLVKGQV TTKYYRLLSK 300
LGGWVWVQSY ATVVHNSRSS RPHCIVSVNY VLTDIEYKEL QLSLDQVSTS KSQDSWRTTL 360
PTSQETRKLA KPKNTKMKTK LRANPYPTQQ YGSFQMDKLE CSQLGSWRAS PPAHGPAPPE 420
QQLHSEGGDL LYAPSYGLPF SYHYGPFPLD SHVFSSKKPV LPAKFGQPQG PPCEVARFLL 480
SALPAGSECQ WRYASPLVPG SPSPAKSLSE PPVNPARHSL MPNYEAPAAA RRFGEDTAPP 540
PPPSFPSCGH YREEPAPGPA KAARQAARDG ARLALGRAPP ECCAPPAPAP PGAPAQLPLV 600
LLNYHRVLAR RGPLGGAAPG APGLACGPGA PEAAGGALRA RAPGPVGPAA APPPGAPRPH 660
YLGASVIITN GR 672

Abbreviation :
CLO : cleft lip only. CPO : cleft palate only. CLP : cleft lip and palate. CL/P : cleft lip with/without cleft palate.
For humans: CL/P, CLO, CPO, and CLP. For mice: CLO, CLP, and CPO.

Protein disorder information

Orthologous information

Relation Gene symbol Entrez ID UniProt ID Cleft type Developmental stage Species Evidence Details
1:1 orthologSIM2A0A5F4C0N9Canis lupus familiarisPredictionMore>>
1:1 orthologSIM2102179422A0A452FXM0Capra hircusPredictionMore>>
1:1 orthologSIM26493Q14190Homo sapiensPredictionMore>>
1:1 orthologSim220465Q61079CPOE14.5Mus musculusPublicationMore>>
1:1 orthologSIM2474107A0A2I3TNB0Pan troglodytesPredictionMore>>
1:1 orthologSIM2I3LA51Sus scrofaPredictionMore>>
1:1 orthologSim2304071D4AA36Rattus norvegicusPredictionMore>>

Gene ontology

GO ID GO Term
GO:0016604 nuclear body
GO:0003677 DNA binding
GO:0003700 DNA-binding transcription factor activity
GO:0046982 protein heterodimerization activity
GO:0009880 embryonic pattern specification
GO:0030324 lung development
GO:0000122 negative regulation of transcription by RNA polymerase II

Functional annotations

Keywords

Keyword ID Keyword Term
KW-0238 DNA-binding
KW-0539 Nucleus
KW-1185 Reference proteome
KW-0677 Repeat
KW-0804 Transcription
KW-0805 Transcription regulation

Interpro

InterPro ID InterPro Term
IPR011598 bHLH_dom
IPR036638 HLH_DNA-bd_sf
IPR001610 PAC
IPR000014 PAS
IPR035965 PAS-like_dom_sf
IPR013767 PAS_fold
IPR013655 PAS_fold_3
IPR010578 SIM_C

PROSITE

PROSITE ID PROSITE Term
PS50888 BHLH
PS50112 PAS
PS51302 SIM_C

Pfam

Pfam ID Pfam Term
PF00989 PAS
PF08447 PAS_3
PF06621 SIM_C