Gene: SCLT1

Basic information

Tag Content
Uniprot ID A0A452G9W1
Entrez ID
Genbank protein ID
Genbank nucleotide ID
Ensembl protein ID ENSCHIP00000033313
Ensembl nucleotide ID ENSCHIG00000026931
Gene name Sodium channel and clathrin linker 1
Gene symbol SCLT1
Organism Capra hircus
NCBI taxa ID 9925
Cleft type
Developmental stage
Data sources Homology search
Reference
Functional description
Sequence
SLDFITIKNF ILYELDLVRN QMSFVKHNCC CVHCFFQRLH NELKDAVVAK QLEALPFGTE 60
MGNEIYTDDE TVRNLQEQLK LASQEKAQAI ELWQTVSQEL CKLQKLYQEH MTEAQIHVLE 120
SQKQKVILDF MTNQHFLKTV TEQSAEIEQL RKQLRQAKLD LRVAAAKVEE LTKVTEGLQG 180
QMQKKEEDMV SAQGREEASD RRLQQLQSSM KQLEARLSVA VQEATQLRAE RTHLEEQTRA 240
LQAKCTIVRA RNSMQLLEEA NLQKNQALLE EKQKQEDIEK MKETVSQIVQ DASLRTRTAL 300
KTSYYECAEK QDQIERAIRE KKAVEEELEK IYREGRINEN DYRKLEEMHQ RCLVAERSKD 360
DLQLRLKTAE NKIKQLEINS SEEISRCQEM IQKLQNILES ERENCGFVSE QRLKLQQENE 420
QLQKQTEDLR KIALEVQKKA KLKISTMEHE FSIKEHGFEV QLREMEDSNR NSTVELRHLL 480
ATTQKAANRW KEETKKLTES TEIRINNLKS ELSRQKLHTQ ELLSQLEMAN EKVVENEKLI 540
LEHQEKSNRL QRRLSEAEQR AASASQQVGS SLIMPG 576

Abbreviation :
CLO : cleft lip only. CPO : cleft palate only. CLP : cleft lip and palate. CL/P : cleft lip with/without cleft palate.
For humans: CL/P, CLO, CPO, and CLP. For mice: CLO, CLP, and CPO.

Protein disorder information

Orthologous information

Relation Gene symbol Entrez ID UniProt ID Cleft type Developmental stage Species Evidence Details
1:1 orthologSCLT1A0A452G9W1Capra hircusPredictionMore>>
1:1 orthologSCLT1100071834F6X4D8Equus caballusPredictionMore>>
1:1 orthologSCLT1132320Q96NL6Homo sapiensPredictionMore>>
1:1 orthologSclt167161G5E861CPOMus musculusPublicationMore>>
1:1 orthologSCLT1461486H2QQ60Pan troglodytesPredictionMore>>
1:1 orthologA0A4X1VFW7Sus scrofaPredictionMore>>
1:1 orthologSclt1266809Q8CJ99Rattus norvegicusPredictionMore>>
1:1 orthologsclt1561057E7EZ46Danio rerioPredictionMore>>

Gene ontology

GO ID GO Term
GO:0005814 centriole
GO:0005813 centrosome
GO:0097539 ciliary transition fiber
GO:0060271 cilium assembly
GO:0045162 clustering of voltage-gated sodium channels

Functional annotations

Keywords

Keyword ID Keyword Term
KW-0175 Coiled coil
KW-1185 Reference proteome

Interpro

InterPro ID InterPro Term
IPR002520 Lipoprotein_7
IPR038911 SCLT1

PROSITE

PROSITE ID PROSITE Term

Pfam

Pfam ID Pfam Term
PF01540 Lipoprotein_7