| Tag | Content |
|---|---|
| Uniprot ID | E7EZ46 |
| Entrez ID | 561057 |
| Genbank protein ID | |
| Genbank nucleotide ID | XM_005159813.3; XM_005159812.3; |
| Ensembl protein ID | ENSDARP00000074234; ENSDARP00000122898; |
| Ensembl nucleotide ID | ENSDARG00000057248 |
| Gene name | Sodium channel and clathrin linker 1 |
| Gene symbol | sclt1 |
| Organism | Danio rerio |
| NCBI taxa ID | 7955 |
| Cleft type | |
| Developmental stage | |
| Data sources | Homology search |
| Reference | |
| Functional description | |
| Sequence | MTTEVEFLRD QVNRLNSVLG RYQDEFPPPS SVSQVEDVVI EAAAPWLADR GLMAPLIEEY 60 DRHIQQMEMQ LKFYQRQMTD VKASLEQVVK ENERLHAEQR LSVEKQLQSL SAGAEGDAAA 120 DAMAISNLEE QVKCAVEEKE RVLQMWQTAS QELDRLQTQF QSSMSDGQIH AVERQHMQSQ 180 LAQLQQHAQK LQLTNQKLDS TNQQFVKTVA EQSAELEDLR RQLRQAKLDQ RSAATKVEEM 240 NRLVQNVQDQ MQRREEDAAE AQGREEASDR RLQQLQAALS QLEARLKSAT QDCESVRRKQ 300 TDCERQVGEL QGRCSSLEDE KFEALSRLRS SIQLAEEASL QREQAQLREK QRAEELEKMK 360 DAMKQLIQNA AMRTRKEVES VRKQCNVQIH RMAEELSALQ LECADKETQI ERAHRERKAV 420 EEELEKVYKE GRVGEPEMRK MEALHQRCLN AERLKDETQL ALNSMNNKMK KMEMEYSEEL 480 SRCQEEVRRL QSALTTARQE STAVSEERLT LQQENQQMHR DMEALRKECA LAQRRAKQQV 540 SSMQQELCVK EQGLESRLRE MEESSKNSSA GLTRLLLAQQ KTISRYKDEA KNLTQAFQQK 600 LNSLRSELNR QKQRVQELEI QMEADHQKIL EFERQVSEQQ EKNTRLQRRL SQAEQRAASA 660 SQQLSVMSQR RKAASMMDLE TLA 683 |
Abbreviation :
CLO : cleft lip only. CPO : cleft palate only.
CLP : cleft lip and palate. CL/P : cleft lip with/without cleft palate.
For humans: CL/P, CLO, CPO, and CLP. For mice: CLO, CLP, and CPO.
| Relation | Gene symbol | Entrez ID | UniProt ID | Cleft type | Developmental stage | Species | Evidence | Details |
|---|---|---|---|---|---|---|---|---|
| 1:1 ortholog | SCLT1 | A0A452G9W1 | Capra hircus | Prediction | More>> | |||
| 1:1 ortholog | SCLT1 | 100071834 | F6X4D8 | Equus caballus | Prediction | More>> | ||
| 1:1 ortholog | SCLT1 | 132320 | Q96NL6 | Homo sapiens | Prediction | More>> | ||
| 1:1 ortholog | Sclt1 | 67161 | G5E861 | CPO | Mus musculus | Publication | More>> | |
| 1:1 ortholog | SCLT1 | 461486 | H2QQ60 | Pan troglodytes | Prediction | More>> | ||
| 1:1 ortholog | A0A4X1VFW7 | Sus scrofa | Prediction | More>> | ||||
| 1:1 ortholog | Sclt1 | 266809 | Q8CJ99 | Rattus norvegicus | Prediction | More>> | ||
| 1:1 ortholog | sclt1 | 561057 | E7EZ46 | Danio rerio | Prediction | More>> |
| GO ID | GO Term |
|---|---|
| GO:0045162 | clustering of voltage-gated sodium channels |
| InterPro ID | InterPro Term |
|---|---|
| IPR038911 | SCLT1 |