| Tag | Content |
|---|---|
| Uniprot ID | H2QQ60; A0A2J8LXN8; |
| Entrez ID | 461486 |
| Genbank protein ID | JAA35494.1; JAA02257.1; JAA27168.1; |
| Genbank nucleotide ID | XM_517437.4 |
| Ensembl protein ID | ENSPTRP00000028232 |
| Ensembl nucleotide ID | ENSPTRG00000016440 |
| Gene name | Sodium channel and clathrin linker 1 |
| Gene symbol | SCLT1 |
| Organism | Pan troglodytes |
| NCBI taxa ID | 9598 |
| Cleft type | |
| Developmental stage | |
| Data sources | Homology search |
| Reference | |
| Functional description | |
| Sequence | MAAEIDFLRE QNRRLNEDFR RYQMESFSKY SSVQKAVCQG EGDDTFENLV FDQSFLAPLV 60 TEYDKHLGEL NGQLKYYQKQ VGEMKLQLEN VIKENERLHS ELKDAVEKKL EAFPLGTEVG 120 TDIYADDETV RNLQEQLQLA NQEKTQAVEL WQTVSQELDR LHKLYQEHMT EAQIHVFESQ 180 KQKDQLFDFQ QLTKQLHVTN ENMEVTNQQF LKTVTEQSVI IEQLQKKLRQ AKLELRVAVA 240 KVEELTNVTE DLQGQMKKKE KDVVSAHGRE EASDRRLQQL QSSIKQLEIR LCVTIQEANQ 300 LRTENTHLEK QTRELQAKCN ELENERYEAI VRARNSMQLL EEANLQKSQA LLEEKQKEED 360 IEKMKETVSR FVQDATIRTK KEVANTKKQC NIQISRLTEE LSALQMECAE KQGQIERVIK 420 EKKAVEEELE KIYREGRGNE SDYRKLEEMH QRFLVSERSK DDLQLRLTRA ENRIKQLETD 480 SSEEISRYQE MIQKLQNVLE SERENCGLVS EQRLKLQQEN KQLRKETESL RKIALEAQKK 540 AKVKISTMEH EFSIKERGFE VQLREMEDSN RNSIVELRHL LATQQKAANR WKEETKKLTE 600 SAEIRINNLK SELSRQKLHT QELLSQLEMA NEKVAENEKL ILEHQEKANR LQRRLSQAEE 660 RAASASQQLS VITVQRRKAA SLMNLENI 688 |
Abbreviation :
CLO : cleft lip only. CPO : cleft palate only.
CLP : cleft lip and palate. CL/P : cleft lip with/without cleft palate.
For humans: CL/P, CLO, CPO, and CLP. For mice: CLO, CLP, and CPO.
| Relation | Gene symbol | Entrez ID | UniProt ID | Cleft type | Developmental stage | Species | Evidence | Details |
|---|---|---|---|---|---|---|---|---|
| 1:1 ortholog | SCLT1 | A0A452G9W1 | Capra hircus | Prediction | More>> | |||
| 1:1 ortholog | SCLT1 | 100071834 | F6X4D8 | Equus caballus | Prediction | More>> | ||
| 1:1 ortholog | SCLT1 | 132320 | Q96NL6 | Homo sapiens | Prediction | More>> | ||
| 1:1 ortholog | Sclt1 | 67161 | G5E861 | CPO | Mus musculus | Publication | More>> | |
| 1:1 ortholog | SCLT1 | 461486 | H2QQ60 | Pan troglodytes | Prediction | More>> | ||
| 1:1 ortholog | A0A4X1VFW7 | Sus scrofa | Prediction | More>> | ||||
| 1:1 ortholog | Sclt1 | 266809 | Q8CJ99 | Rattus norvegicus | Prediction | More>> | ||
| 1:1 ortholog | sclt1 | 561057 | E7EZ46 | Danio rerio | Prediction | More>> |
| GO ID | GO Term |
|---|---|
| GO:0005814 | centriole |
| GO:0005813 | centrosome |
| GO:0097539 | ciliary transition fiber |
| GO:0060271 | cilium assembly |
| GO:0045162 | clustering of voltage-gated sodium channels |
| InterPro ID | InterPro Term |
|---|---|
| IPR038911 | SCLT1 |