| Tag | Content |
|---|---|
| Uniprot ID | B3DG59 |
| Entrez ID | |
| Genbank protein ID | AAI62283.1; AAI62290.1; |
| Genbank nucleotide ID | |
| Ensembl protein ID | ENSDARP00000147264 |
| Ensembl nucleotide ID | ENSDARG00000116118 |
| Gene name | Msxe protein |
| Gene symbol | msx1a |
| Organism | Danio rerio |
| NCBI taxa ID | 7955 |
| Cleft type | |
| Developmental stage | |
| Data sources | Homology search |
| Reference | |
| Functional description | |
| Sequence | MAPVVTMSSQ AAEEDAGVML AGQTEMQTRV TVQEDAQRPK ILPFSVEALM ADRKPSRGSP 60 DADARLAFSV EVLQLPVKAE SPERSTWVPA ARFSPSRLSP PACPLRKHKT NRKPRTPFST 120 AQLLALERKF RQKQYLSIAE RAEFSSSLSL TETQVKIWFQ NRRAKAKRLQ EAELEKLKMA 180 AKPLLPPAFG ISFPAGAHIP AYSAGSHPFH RHSANVSPVG LYTHMGYSMY HLA 233 |
Abbreviation :
CLO : cleft lip only. CPO : cleft palate only.
CLP : cleft lip and palate. CL/P : cleft lip with/without cleft palate.
For humans: CL/P, CLO, CPO, and CLP. For mice: CLO, CLP, and CPO.
| Relation | Gene symbol | Entrez ID | UniProt ID | Cleft type | Developmental stage | Species | Evidence | Details |
|---|---|---|---|---|---|---|---|---|
| 1:1 ortholog | MSX1 | 102190677 | A0A452EK01 | Capra hircus | Prediction | More>> | ||
| 1:1 ortholog | MSX1 | 4487 | P28360 | CPO,CL/P | Homo sapiens | Publication | More>> | |
| 1:1 ortholog | Msx1 | 17701 | P13297 | CPO,CLP | E11.5, E13.0, E12.5, E14.0, E13.5, E14.5, E15.0, E15.5, E16.0 | Mus musculus | Publication | More>> |
| 1:1 ortholog | MSX1 | 461092 | Q2VL88 | Pan troglodytes | Prediction | More>> | ||
| 1:1 ortholog | MSX1 | F1S5G6 | Sus scrofa | Prediction | More>> | |||
| 1:1 ortholog | Msx1 | G3V6U7 | Rattus norvegicus | Prediction | More>> | |||
| 1:1 ortholog | msx1a | B3DG59 | Danio rerio | Prediction | More>> |
| GO ID | GO Term |
|---|---|
| GO:0005634 | nucleus |
| GO:0000981 | DNA-binding transcription factor activity, RNA polymerase II-specific |
| GO:0000977 | RNA polymerase II transcription regulatory region sequence-specific DNA binding |
| GO:0048598 | embryonic morphogenesis |
| GO:0043049 | otic placode formation |
| GO:0006357 | regulation of transcription by RNA polymerase II |
| Pfam ID | Pfam Term |
|---|---|
| PF00046 | Homeodomain |