Gene: pygo1

Basic information

Tag Content
Uniprot ID B7ZUU3
Entrez ID
Genbank protein ID AAI71351.1
Genbank nucleotide ID
Ensembl protein ID ENSDARP00000132493
Ensembl nucleotide ID ENSDARG00000098687
Gene name Pygopus family PHD finger 1
Gene symbol pygo1
Organism Danio rerio
NCBI taxa ID 7955
Cleft type
Developmental stage
Data sources Homology search
Reference
Functional description
Sequence
MSTEQEKESF SLKRNRGGEA GLDVLAGPGL LLGSPDKKRR KSSTQAPPFS PLSEYAPPPN 60
PSADHLIAAN PFDDNYISPS LKPYFGHSHY PASNSYGSSR MPSPYGPTIQ TQPQYFSQNP 120
TGFSRTHRFN YSPNYVHAFC GGNNNNNNMH FGSVEHGDQI PLQNLNQRSP GFNPDANTTR 180
NMSPNLNNFT QSNTKQDHSE AANKKHSHNV NCEENATQDN KTKGGPEKLN GVFHSNNEKK 240
SPDYRRSALR MNKVKRRSTS SSSEPVFPCG ICLNEVNDDQ EAILCEASCQ KWFHRVCTGM 300
TETAYNLLTA ETSAVWGCDT CMEDREVQMM KNSDGQS 337

Abbreviation :
CLO : cleft lip only. CPO : cleft palate only. CLP : cleft lip and palate. CL/P : cleft lip with/without cleft palate.
For humans: CL/P, CLO, CPO, and CLP. For mice: CLO, CLP, and CPO.

Protein disorder information

Orthologous information

Relation Gene symbol Entrez ID UniProt ID Cleft type Developmental stage Species Evidence Details
1:1 orthologPYGO1527394F1MHP8Bos taurusPredictionMore>>
1:1 orthologPYGO1A0A452G0X5Capra hircusPredictionMore>>
1:1 orthologPYGO126108Q9Y3Y4Homo sapiensPredictionMore>>
1:1 orthologPygo172135Q9D0P5CPOMus musculusPublicationMore>>
1:1 orthologPYGO1467804A0A2I3T6C4Pan troglodytesPredictionMore>>
1:1 orthologPYGO1100156479F1RZF2Sus scrofaPredictionMore>>
1:1 orthologPYGO1100342223G1T1W7Oryctolagus cuniculusPredictionMore>>
1:1 orthologPygo1691857F1M5T3Rattus norvegicusPredictionMore>>
1:1 orthologpygo1B7ZUU3Danio rerioPredictionMore>>

Gene ontology

GO ID GO Term
GO:0046872 metal ion binding
GO:0048703 embryonic viscerocranium morphogenesis
GO:1905066 regulation of canonical Wnt signaling pathway involved in heart development

Functional annotations

Keywords

Keyword ID Keyword Term
KW-0479 Metal-binding
KW-1185 Reference proteome
KW-0862 Zinc
KW-0863 Zinc-finger

Interpro

InterPro ID InterPro Term
IPR019786 Zinc_finger_PHD-type_CS
IPR011011 Znf_FYVE_PHD
IPR001965 Znf_PHD
IPR019787 Znf_PHD-finger
IPR013083 Znf_RING/FYVE/PHD

PROSITE

PROSITE ID PROSITE Term
PS01359 ZF_PHD_1
PS50016 ZF_PHD_2

Pfam

Pfam ID Pfam Term
PF00628 PHD