| Tag | Content |
|---|---|
| Uniprot ID | F1RZF2 |
| Entrez ID | 100156479 |
| Genbank protein ID | |
| Genbank nucleotide ID | XM_005654441.2 |
| Ensembl protein ID | ENSSSCP00000004964 |
| Ensembl nucleotide ID | ENSSSCG00000004607 |
| Gene name | Pygopus family PHD finger 1 |
| Gene symbol | PYGO1 |
| Organism | Sus scrofa |
| NCBI taxa ID | 9823 |
| Cleft type | |
| Developmental stage | |
| Data sources | Homology search |
| Reference | |
| Functional description | |
| Sequence | MSAEQEKDPI SLKRVRGGDS GLDGLGGPGV QLGSPDKKKR KTNTQGPSFP PLSEYAPPPN 60 PNSDHLVAAN PFDDNYNTIS YKPLPSSNPY LGPGYPGFGG YSTFRMPPHV PPRMSSPYCG 120 PYSLRNQPHP FPQNPLGMGF NRPHAFNFGP HDNSSFGNPS YNNALSQNVN MPNQHFRQNP 180 AENFNQIPPQ NASQVSNPDL ASNFVPGNNS NFTSPLEPNH SFIPPPNTFG QAKPPPQKQD 240 FSQGATKNTN QNSSAHPPHL NMDDTVNQSN IELKNVNRNN VVNQENSRSN STEATNNSHA 300 NGTQNKPRQP RGATDTCTTE KSNKSSLHPS RHGHSSSDPV YPCGICTNEV NDDQDAILCE 360 ASCQKWFHRI CTGMTETAYG LLTAEASAVW GCDTCMADKD VQLMRTRETF GAPAVGSDT 419 |
Abbreviation :
CLO : cleft lip only. CPO : cleft palate only.
CLP : cleft lip and palate. CL/P : cleft lip with/without cleft palate.
For humans: CL/P, CLO, CPO, and CLP. For mice: CLO, CLP, and CPO.
| Relation | Gene symbol | Entrez ID | UniProt ID | Cleft type | Developmental stage | Species | Evidence | Details |
|---|---|---|---|---|---|---|---|---|
| 1:1 ortholog | PYGO1 | 527394 | F1MHP8 | Bos taurus | Prediction | More>> | ||
| 1:1 ortholog | PYGO1 | A0A452G0X5 | Capra hircus | Prediction | More>> | |||
| 1:1 ortholog | PYGO1 | 26108 | Q9Y3Y4 | Homo sapiens | Prediction | More>> | ||
| 1:1 ortholog | Pygo1 | 72135 | Q9D0P5 | CPO | Mus musculus | Publication | More>> | |
| 1:1 ortholog | PYGO1 | 467804 | A0A2I3T6C4 | Pan troglodytes | Prediction | More>> | ||
| 1:1 ortholog | PYGO1 | 100156479 | F1RZF2 | Sus scrofa | Prediction | More>> | ||
| 1:1 ortholog | PYGO1 | 100342223 | G1T1W7 | Oryctolagus cuniculus | Prediction | More>> | ||
| 1:1 ortholog | Pygo1 | 691857 | F1M5T3 | Rattus norvegicus | Prediction | More>> | ||
| 1:1 ortholog | pygo1 | B7ZUU3 | Danio rerio | Prediction | More>> |
| GO ID | GO Term |
|---|---|
| GO:0005634 | nucleus |
| GO:0046872 | metal ion binding |
| GO:0035064 | methylated histone binding |
| GO:0060070 | canonical Wnt signaling pathway |
| GO:0002244 | hematopoietic progenitor cell differentiation |
| GO:0001822 | kidney development |
| GO:0045944 | positive regulation of transcription by RNA polymerase II |
| GO:0034504 | protein localization to nucleus |
| GO:0007289 | spermatid nucleus differentiation |
| Pfam ID | Pfam Term |
|---|---|
| PF00628 | PHD |