| Tag | Content |
|---|---|
| Uniprot ID | B8JHX5 |
| Entrez ID | |
| Genbank protein ID | |
| Genbank nucleotide ID | |
| Ensembl protein ID | ENSDARP00000119466 |
| Ensembl nucleotide ID | ENSDARG00000092738 |
| Gene name | Si:ch211-263k4.2 |
| Gene symbol | prdm16 |
| Organism | Danio rerio |
| NCBI taxa ID | 7955 |
| Cleft type | |
| Developmental stage | |
| Data sources | Homology search |
| Reference | |
| Functional description | |
| Sequence | MRSKARARKL AKNDSEAVDS MYDTEPNLVT GESAEEETED SIMSPVAVGP ASPQPCNEDF 60 TPKEGSPYEV PVYIPDDIPI PADLELRESS VPGAGLGIWA KVKIRMGERF GPYNGLQSAT 120 VKETTYGWE 129 |
Abbreviation :
CLO : cleft lip only. CPO : cleft palate only.
CLP : cleft lip and palate. CL/P : cleft lip with/without cleft palate.
For humans: CL/P, CLO, CPO, and CLP. For mice: CLO, CLP, and CPO.
| Relation | Gene symbol | Entrez ID | UniProt ID | Cleft type | Developmental stage | Species | Evidence | Details |
|---|---|---|---|---|---|---|---|---|
| 1:1 ortholog | PRDM16 | A0A452F1P6 | Capra hircus | Prediction | More>> | |||
| 1:1 ortholog | PRDM16 | 63976 | Q9HAZ2 | Homo sapiens | Prediction | More>> | ||
| 1:1 ortholog | Prdm16 | 70673 | A2A935 | CPO | E14.5 | Mus musculus | Publication | More>> |
| 1:1 ortholog | PRDM16 | 457227 | H2R9K2 | Pan troglodytes | Prediction | More>> | ||
| 1:1 ortholog | Prdm16 | 100366024 | A0A096MJ70 | Rattus norvegicus | Prediction | More>> | ||
| 1:1 ortholog | prdm16 | B8JHX5 | Danio rerio | Prediction | More>> |
| GO ID | GO Term |
|---|---|
| GO:0005634 | nucleus |
| GO:0001228 | DNA-binding transcription activator activity, RNA polymerase II-specific |
| GO:0000978 | RNA polymerase II cis-regulatory region sequence-specific DNA binding |
| GO:0006357 | regulation of transcription by RNA polymerase II |
| Keyword ID | Keyword Term |
|---|---|
| KW-1185 | Reference proteome |