Gene: Rad54b

Basic information

Tag Content
Uniprot ID F1LYB7
Entrez ID 313063
Genbank protein ID
Genbank nucleotide ID XM_017593341.1
Ensembl protein ID ENSRNOP00000058084
Ensembl nucleotide ID ENSRNOG00000039949
Gene name RAD54 homolog B
Gene symbol Rad54b
Organism Rattus norvegicus
NCBI taxa ID 10116
Cleft type
Developmental stage
Data sources Homology search
Reference
Functional description
Sequence
MRRSAAPSQV RGNSSKKARF VPPGRSTTGV SKEISMSPEA KLVQGAHQSQ GDAGVCSSNP 60
WLTEGSPVEM GDGARVDPLS PVHLASKEII ESKAQEEEAS SLLKYFSVVW CKASKKKHKK 120
WEGDAILIVK GRSFILKDME GKDIGRGIGY KFKELENVEE GQTLMLGGKE IEILGTVSAE 180
DFNSGKCFQA GSGSPAVPSS QAARKCFSNP FKSVCQSTQA RRDRGNDWQN CKPRYDPYTP 240
NALVMPRPDK SHQWAFNRSC LPTVDVVIDP HLVRHLRPHQ KDGVAFLYEC VMGMRAVGKC 300
GAILADEMGL GKTLQCISLI WTLQCQGPYG GKPIVKRTLI VTPGSLVNNW RKEFQKWLGS 360
ERIKIFTVDQ DHKVEEFINS AFHSVLIISY EMLLRSLDRI KTITFGLLIC DEGHRLKNSG 420
IKTTAALSSL SCEKRVILTG TPVQNDLQEF FALVDFVNPG ILGSLSSYRR IYEEPIVMSR 480
EPSASKEERE LGERRTTELT RLTGCFILRR TQEVINKYLP PKIENVVFCR PGALQIELYR 540
KLLSSQSVRF CLQGLLGNSA HLICIGALKK LCNHPRLLFS FVKGKEFNSS RDENEERSLC 600
QGLLTVFPAG YNLLQLSESE SGKLQVLVKL LAAISELRPT EKVILVSNYR QTLNLLEEVC 660
KCHGYACARL DGQTPVSQRQ QIVDNFNSKY STDFIFLLSS KAGGVGLNLI GGSHLILYDI 720
DWNPATDIQA MARVWRDGQK HPVHVYRLLT TGTIEEKIYQ RQISKQGLSG AVVDLTRSSE 780
QIQFSVEELK NLFTLHENSH CVTHDLLDCE CTGEKDHSDD ASENPVTSRQ CQLGPQKSSS 840
SRPLSMSQLK QWKHFSGDHL NLPDPFLERI RENVSFFFQN ITNQAPAI 888

Abbreviation :
CLO : cleft lip only. CPO : cleft palate only. CLP : cleft lip and palate. CL/P : cleft lip with/without cleft palate.
For humans: CL/P, CLO, CPO, and CLP. For mice: CLO, CLP, and CPO.

Protein disorder information

Orthologous information

Relation Gene symbol Entrez ID UniProt ID Cleft type Developmental stage Species Evidence Details
1:1 orthologRAD54B533414F1MSA4Bos taurusPredictionMore>>
1:1 orthologRAD54B487053F1PW14Canis lupus familiarisPredictionMore>>
1:1 orthologFSBP102186978A0A452DW56Capra hircusPredictionMore>>
1:1 orthologRAD54B25788Q9Y620Homo sapiensPublicationMore>>
1:1 orthologRad54b623474Q6PFE3Mus musculusPredictionMore>>
1:1 orthologRad54b313063F1LYB7Rattus norvegicusPredictionMore>>
1:1 ortholograd54b560482E9QHY4Danio rerioPredictionMore>>

Gene ontology

GO ID GO Term
GO:0005634 nucleus
GO:0005524 ATP binding
GO:0015616 DNA translocase activity
GO:0042802 identical protein binding
GO:0006974 cellular response to DNA damage stimulus
GO:0008340 determination of adult lifespan
GO:0000724 double-strand break repair via homologous recombination
GO:0007131 reciprocal meiotic recombination
GO:0042493 response to drug
GO:0010212 response to ionizing radiation

Functional annotations

Keywords

Keyword ID Keyword Term
KW-1185 Reference proteome

Interpro

InterPro ID InterPro Term
IPR014001 Helicase_ATP-bd
IPR001650 Helicase_C
IPR027417 P-loop_NTPase
IPR038718 SNF2-like_sf
IPR000330 SNF2_N

PROSITE

PROSITE ID PROSITE Term
PS51192 HELICASE_ATP_BIND_1
PS51194 HELICASE_CTER

Pfam

Pfam ID Pfam Term
PF00271 Helicase_C
PF00176 SNF2_N