Gene: RAD54B

Basic information

Tag Content
Uniprot ID F1PW14
Entrez ID 487053
Genbank protein ID
Genbank nucleotide ID XM_005638132.2
Ensembl protein ID ENSCAFP00000013503
Ensembl nucleotide ID ENSCAFG00000009179
Gene name RAD54 homolog B
Gene symbol RAD54B
Organism Canis lupus familiaris
NCBI taxa ID 9615
Cleft type
Developmental stage
Data sources Homology search
Reference
Functional description
Sequence
MRRSAAPSQL QGNPLKKLKF VPPARSNPSP DEGITKMSPD VKLIEVVGSQ NTFLQVKSNP 60
RICSLNLPTE GSAREINHEC NYSEKHCSEA SVTATLDLPH TVHPAPKEIT VSKGQEEEEP 120
DSLVKYFSVV WCKASKKKHK KWEGDAVLIV KGKSFTLKDL EGKDIGRGMA YKLKELEKIE 180
EGHRVMIGGK EVEIMGIISP DDFSSGRCFQ LGIGSPAISS SSQAAKKCFS NPFKSVCKPS 240
SKENRLGGFQ DCKPRHDPHA PNSLVMSRPD NNHQWTFNKK GFPVVDVVID PHLVYHLRPH 300
QKEGIMFLYE CVMGMRVNGR CGAILADEMG LGKTLQCISL IWTLQCQGPY GGKPVVKKTL 360
IVTPGSLVNN WRKEFQKWLG SERIKIFPVD QDHKVEEFTR SPFYSVLIIS YEMLLRSLDQ 420
IKNVKFGLLI CDEGHRLKNS AIKTTAALIS LSCEKRVILT GTPVQNDLQE FFALIDFVNP 480
GILGSLSFYR KVYEEPIIIS RQPSASEEEK KLGEKRAVEL TCLTGLFILR RTQEVINKYL 540
PPKIENVVFC RPGALQIELY RKLLNSQAVR FCLQGLLGNS PHLICIGALK KLCNHPCLLF 600
NSIKEKECSS TWDGKEEKSL YEALLDVFPA DYNPLMFSEE ESGKLQVLLK LLAVIHELRP 660
TEKVVLVSNY TQTLDILQEV CKRHGYTYTR LDGQTPVSQR QQIVDSFNSK YSSDFIFLLS 720
SKAGGVGLNL IGGSHLILYD IDWNPATDIQ AMSRVWRDGQ KNPVHIYRLL TTGTIEEKIY 780
QRQISKQDLS GAVVDLTRTS EHIQFSVEEL KNLFTLHESS HCVTHDLLDC ECTGDQDGTG 840
DSLEKFPVSR NCQLGAHQQK SNSLKPLSMS QLKQWKHFSG DHLNLTDPFL ERIRENVSFF 900
FQNITNQSTA II 912

Abbreviation :
CLO : cleft lip only. CPO : cleft palate only. CLP : cleft lip and palate. CL/P : cleft lip with/without cleft palate.
For humans: CL/P, CLO, CPO, and CLP. For mice: CLO, CLP, and CPO.

Protein disorder information

Orthologous information

Relation Gene symbol Entrez ID UniProt ID Cleft type Developmental stage Species Evidence Details
1:1 orthologRAD54B533414F1MSA4Bos taurusPredictionMore>>
1:1 orthologRAD54B487053F1PW14Canis lupus familiarisPredictionMore>>
1:1 orthologFSBP102186978A0A452DW56Capra hircusPredictionMore>>
1:1 orthologRAD54B25788Q9Y620Homo sapiensPublicationMore>>
1:1 orthologRad54b623474Q6PFE3Mus musculusPredictionMore>>
1:1 orthologRad54b313063F1LYB7Rattus norvegicusPredictionMore>>
1:1 ortholograd54b560482E9QHY4Danio rerioPredictionMore>>

Gene ontology

GO ID GO Term
GO:0005634 nucleus
GO:0005524 ATP binding
GO:0015616 DNA translocase activity
GO:0008340 determination of adult lifespan
GO:0000724 double-strand break repair via homologous recombination
GO:0007131 reciprocal meiotic recombination
GO:0042493 response to drug
GO:0010212 response to ionizing radiation

Functional annotations

Keywords

Keyword ID Keyword Term
KW-1185 Reference proteome

Interpro

InterPro ID InterPro Term
IPR014001 Helicase_ATP-bd
IPR001650 Helicase_C
IPR027417 P-loop_NTPase
IPR038718 SNF2-like_sf
IPR000330 SNF2_N

PROSITE

PROSITE ID PROSITE Term
PS51192 HELICASE_ATP_BIND_1
PS51194 HELICASE_CTER

Pfam

Pfam ID Pfam Term
PF00271 Helicase_C
PF00176 SNF2_N