Gene: RAD54B

Basic information

Tag Content
Uniprot ID F1MSA4
Entrez ID 533414
Genbank protein ID
Genbank nucleotide ID NM_001192955.1
Ensembl protein ID ENSBTAP00000000833
Ensembl nucleotide ID ENSBTAG00000000632
Gene name Uncharacterized protein
Gene symbol RAD54B
Organism Bos taurus
NCBI taxa ID 9913
Cleft type
Developmental stage
Data sources Homology search
Reference
Functional description
Sequence
MRRSAAPSQL QGNPFKKPKF ISPARSHPSP NEEVAKLNSD IKLFEVAANK NNFLQPQNDP 60
RTCNFNLPTK ECAKGINHGD NYREKYCLEA STKTTLDLHH TVHSAPKEIT VSKGQEEKPD 120
SLVKYFSVVW CKASKKKHKK WEGDGVLIVK GKSFTLKDLE GKDIGRGTGY KLKELEKIEE 180
GQTMMIGGKE IEVMGIISPD DFNSGRCFQF GGGCSAILSS SQAAKKCFSN PFKSVCKLSS 240
KENKQNSFQS CKPRHDPYAP NSLVMLRPDK NHQWLFNKNC FPVVDVVIDP HLVYYLRPHQ 300
KEGITFLYEC VMGMRVNGRC GAILADEMGL GKTLQCISLI WTLQCQGPYG GKPIVKKTLI 360
VTPGSLVNNW KKEFQKWLGI ERIKIFTVDQ DHKVEEFTKS PFYSVLIISY EMLLRSLDQI 420
KNVKFDLLIC DEGHRLKNST IKTTTALISL SCEKRIILTG TPVQNDLQEF FTLIDFVNPG 480
ILGSLSAYRK IYEEPIIISR QPSASEEERE LGEQRAAELT CLTGLFILRR TQEVINQYLP 540
PKIENVVFCR PGALQIALYR KLLNSQAVRF CLQGLLENTS HLICIGALKK LCNHPCLLFG 600
SIKEKESNST WDESEERNLY EGLMNVFPAD YNPIMFTEEE SGKLQVLSKL LAVIRELRPA 660
EKVVLVSNYT RTLDILQEVC KRHGYAYTRL DGQTPISQRQ QIVDGFNSKY SSDFIFLLSS 720
KAGGVGLNLI GGSHLILYDI DWNPATDIQA MSRVWRDGQK HPVHIYRLLT TGTIEEKIYQ 780
RQISKQGLSG AVVDLSKTSD HIQFSVEELK NLFTLHESSH CVTHDLLDCE CTGENHTGDS 840
LEKLPVSRNC QLGPHQQKSD SLKPLSMSQL KQWRHFPGDH LNLTDPFLER IRENVSFFFQ 900
NITNQTTAI 909

Abbreviation :
CLO : cleft lip only. CPO : cleft palate only. CLP : cleft lip and palate. CL/P : cleft lip with/without cleft palate.
For humans: CL/P, CLO, CPO, and CLP. For mice: CLO, CLP, and CPO.

Protein disorder information

Orthologous information

Relation Gene symbol Entrez ID UniProt ID Cleft type Developmental stage Species Evidence Details
1:1 orthologRAD54B533414F1MSA4Bos taurusPredictionMore>>
1:1 orthologRAD54B487053F1PW14Canis lupus familiarisPredictionMore>>
1:1 orthologFSBP102186978A0A452DW56Capra hircusPredictionMore>>
1:1 orthologRAD54B25788Q9Y620Homo sapiensPublicationMore>>
1:1 orthologRad54b623474Q6PFE3Mus musculusPredictionMore>>
1:1 orthologRad54b313063F1LYB7Rattus norvegicusPredictionMore>>
1:1 ortholograd54b560482E9QHY4Danio rerioPredictionMore>>

Gene ontology

GO ID GO Term
GO:0005634 nucleus
GO:0005524 ATP binding
GO:0015616 DNA translocase activity
GO:0008340 determination of adult lifespan
GO:0000724 double-strand break repair via homologous recombination
GO:0007131 reciprocal meiotic recombination
GO:0042493 response to drug
GO:0010212 response to ionizing radiation

Functional annotations

Keywords

Keyword ID Keyword Term
KW-1185 Reference proteome

Interpro

InterPro ID InterPro Term
IPR014001 Helicase_ATP-bd
IPR001650 Helicase_C
IPR027417 P-loop_NTPase
IPR038718 SNF2-like_sf
IPR000330 SNF2_N

PROSITE

PROSITE ID PROSITE Term
PS51192 HELICASE_ATP_BIND_1
PS51194 HELICASE_CTER

Pfam

Pfam ID Pfam Term
PF00271 Helicase_C
PF00176 SNF2_N