Gene: NTN1

Basic information

Tag Content
Uniprot ID F1N0C7
Entrez ID 522767
Genbank protein ID
Genbank nucleotide ID NM_001192566.1; XM_005220368.3;
Ensembl protein ID ENSBTAP00000061493; ENSBTAP00000016103;
Ensembl nucleotide ID ENSBTAG00000012137
Gene name Netrin 1
Gene symbol NTN1
Organism Bos taurus
NCBI taxa ID 9913
Cleft type
Developmental stage
Data sources Homology search
Reference
Functional description
Sequence
MRAVWEALAA LAAVACLVGA VRGGPGLSMF AGQAAQPDPC SDENGHPRRC IPDFVNAAFG 60
KDVRVSSTCG RPPARYCVVS ERGEERLRSC HLCNASDPKK AHPPAFLTDL NNPHNLTCWQ 120
SENYLQFPHN VTLTLSLGKK FEVTYVSLQF CSPRPESMAI YKSMDYGRTW VPFQFYSTQC 180
RKMYNRPHRA PITKQNEQEA VCTDSHTDMR PLSGGLIAFS TLDGRPSAHD FDNSPVLQDW 240
VTATDIRVAF SRLHTFGDEN EDDSELARDS YFYAVSDLQV GGRCKCNGHA ARCVRDRDDS 300
LVCDCRHNTA GPECDRCKPF HYDRPWQRAT AREANECVAC NCNLHARRCR FNMELYKLSG 360
RKSGGVCLNC RHNTAGRHCH YCKEGYYRDL GKPITHRKAC KACDCHPVGA AGKTCNQTTG 420
QCPCKDGVTG ITCNRCAKGY QQSRSPIAPC IKIPVAPPTT AASSVEEPED CDSYCKASKG 480
KLKINMKKYC KKDYAVQIHI LKADKAGDWW KFTVNIISVY KQGTSRIRRG DQNLWIRSRD 540
IACKCPKIKP LKKYLLLGNA EDSPDQSGIV ADKSSLVIQW RDTWARRLRK FQQREKKGKC 600
KKA 603

Abbreviation :
CLO : cleft lip only. CPO : cleft palate only. CLP : cleft lip and palate. CL/P : cleft lip with/without cleft palate.
For humans: CL/P, CLO, CPO, and CLP. For mice: CLO, CLP, and CPO.

Protein disorder information

Orthologous information

Relation Gene symbol Entrez ID UniProt ID Cleft type Developmental stage Species Evidence Details
1:1 orthologNTN1522767F1N0C7Bos taurusPredictionMore>>
1:1 orthologNTN1A0A452FGQ4Capra hircusPredictionMore>>
1:1 orthologNTN19423O95631Homo sapiensPublicationMore>>
1:1 orthologNtn118208O09118Mus musculusPredictionMore>>
1:1 orthologNTN1455083H2QC90Pan troglodytesPredictionMore>>
1:1 orthologA0A4X1V6Z8Sus scrofaPredictionMore>>
1:1 orthologNtn1F1LPC8Rattus norvegicusPredictionMore>>
1:1 orthologntn1a30227O42140Danio rerioPredictionMore>>

Gene ontology

GO ID GO Term
GO:0005604 basement membrane
GO:0005737 cytoplasm
GO:0009887 animal organ morphogenesis
GO:0033564 anterior/posterior axon guidance
GO:0098609 cell-cell adhesion
GO:0061643 chemorepulsion of axon
GO:0016358 dendrite development
GO:0042472 inner ear morphogenesis
GO:0060603 mammary gland duct morphogenesis
GO:0008045 motor neuron axon guidance
GO:0030517 negative regulation of axon extension
GO:0001764 neuron migration
GO:0007097 nuclear migration
GO:0045773 positive regulation of axon extension
GO:0008284 positive regulation of cell population proliferation
GO:0030334 regulation of cell migration
GO:0051963 regulation of synapse assembly
GO:0009888 tissue development

Functional annotations

Keywords

Keyword ID Keyword Term
KW-1015 Disulfide bond
KW-0424 Laminin EGF-like domain
KW-1185 Reference proteome
KW-0964 Secreted
KW-0732 Signal

Interpro

InterPro ID InterPro Term
IPR008979 Galactose-bd-like_sf
IPR002049 Laminin_EGF
IPR008211 Laminin_N
IPR038684 Laminin_N_sf
IPR001134 Netrin_domain
IPR018933 Netrin_module_non-TIMP
IPR008993 TIMP-like_OB-fold

PROSITE

PROSITE ID PROSITE Term
PS01248 EGF_LAM_1
PS50027 EGF_LAM_2
PS51117 LAMININ_NTER
PS50189 NTR

Pfam

Pfam ID Pfam Term
PF00053 Laminin_EGF
PF00055 Laminin_N
PF01759 NTR