Gene: bmp4

Basic information

Tag Content
Uniprot ID F1QAD6
Entrez ID
Genbank protein ID
Genbank nucleotide ID
Ensembl protein ID ENSDARP00000069635
Ensembl nucleotide ID ENSDARG00000019995
Gene name Bone morphogenetic protein 4
Gene symbol bmp4
Organism Danio rerio
NCBI taxa ID 7955
Cleft type
Developmental stage
Data sources Homology search
Reference
Functional description
Sequence
MIPGNRMLMV ILLCQVLLGE SSYASLIPEE GKKKASALHL AQSHELLRDF EATLLHMFGL 60
QRRPRPSHSA VVPQYLLDLY RLQSGELEEA GAQHVSFDYP ERSTSRANTV RGFHHEEHLE 120
ELQSDSSQET PLRFVFNLSS IPEDELISTA ELRVYRQQID DAFSDPDQTG DHGLHRINIY 180
EVLKAPREGQ LITQLLDTRL VRHNTSKWES FDVSPAVLRW TQEKRSNHGL AVEVVQMKRN 240
PVQKGRHVRV SRSVHPLPDE EWDQLRPLLV TFGHDGKSHP LTRRAKRSPK QRGRKRNRNC 300
RRHALYVDFS DVGWNDWIVA PPGYQAYYCH GECPFPLADH LNSTNHAIVQ TLVNSVNTNI 360
PKACCVPTEL SAISMLYLDE TDRVVLKNYQ EMVVEGCGCR

Abbreviation :
CLO : cleft lip only. CPO : cleft palate only. CLP : cleft lip and palate. CL/P : cleft lip with/without cleft palate.
For humans: CL/P, CLO, CPO, and CLP. For mice: CLO, CLP, and CPO.

Protein disorder information

Orthologous information

Relation Gene symbol Entrez ID UniProt ID Cleft type Developmental stage Species Evidence Details
1:1 orthologBMP4407216Q2KJH1Bos taurusPredictionMore>>
1:1 orthologBMP4490695F1PDL1Canis lupus familiarisPredictionMore>>
1:1 orthologBMP4100860789A0A2Z4FRB3Capra hircusPredictionMore>>
1:1 orthologBMP4100034048F6QG82Equus caballusPredictionMore>>
1:1 orthologBMP4652P12644CPO,CL/PHomo sapiensPublicationMore>>
1:1 orthologBmp412159P21275CPO,CLOE11.5, E12.5, E13.5, E14.5, E15.5, E16.5Mus musculusPublicationMore>>
1:1 orthologBMP4100113425A7LJT9Sus scrofaPredictionMore>>
1:1 orthologBMP4100009569G1T0L5Oryctolagus cuniculusPredictionMore>>
1:1 orthologBmp425296Q6AYU9Rattus norvegicusPredictionMore>>
1:1 orthologbmp4F1QAD6Danio rerioPredictionMore>>

Gene ontology

GO ID GO Term
GO:0005615 extracellular space
GO:0070700 BMP receptor binding
GO:0005125 cytokine activity
GO:0008083 growth factor activity
GO:0061312 BMP signaling pathway involved in heart development
GO:0003303 BMP signaling pathway involved in heart jogging
GO:0060803 BMP signaling pathway involved in mesodermal cell fate specification
GO:0045165 cell fate commitment
GO:0035844 cloaca development
GO:0061371 determination of heart left/right asymmetry
GO:0007368 determination of left/right symmetry
GO:0071910 determination of liver left/right asymmetry
GO:0035469 determination of pancreatic left/right asymmetry
GO:0048264 determination of ventral identity
GO:0048565 digestive tract development
GO:0009953 dorsal/ventral pattern formation
GO:0035125 embryonic anal fin morphogenesis
GO:0035162 embryonic hemopoiesis
GO:0007507 heart development
GO:0003146 heart jogging
GO:0001947 heart looping
GO:0001707 mesoderm formation
GO:0043066 negative regulation of apoptotic process
GO:0042664 negative regulation of endodermal cell fate specification
GO:0000122 negative regulation of transcription by RNA polymerase II
GO:0060034 notochord cell differentiation
GO:0030903 notochord development
GO:0030513 positive regulation of BMP signaling pathway
GO:0008284 positive regulation of cell population proliferation
GO:0010862 positive regulation of pathway-restricted SMAD protein phosphorylation
GO:0003342 proepicardium development
GO:0048793 pronephros development
GO:0060395 SMAD protein signal transduction

Functional annotations

Keywords

Keyword ID Keyword Term
KW-0339 Growth factor
KW-1185 Reference proteome
KW-0964 Secreted
KW-0732 Signal

Interpro

InterPro ID InterPro Term
IPR029034 Cystine-knot_cytokine
IPR001839 TGF-b_C
IPR001111 TGF-b_propeptide
IPR015615 TGF-beta-rel
IPR017948 TGFb_CS

PROSITE

PROSITE ID PROSITE Term
PS00250 TGF_BETA_1
PS51362 TGF_BETA_2

Pfam

Pfam ID Pfam Term
PF00019 TGF_beta
PF00688 TGFb_propeptide