Gene: mthfd1l

Basic information

Tag Content
Uniprot ID F1QQ79
Entrez ID 100034522
Genbank protein ID
Genbank nucleotide ID XM_005160551.3; XM_005160552.3; NM_001242996.1;
Ensembl protein ID ENSDARP00000061913; ENSDARP00000154669;
Ensembl nucleotide ID ENSDARG00000042221
Gene name Formyltetrahydrofolate synthetase
Gene symbol mthfd1l
Organism Danio rerio
NCBI taxa ID 7955
Cleft type
Developmental stage
Data sources Homology search
Reference
Functional description
Sequence
MMRLSVAFRH ARRSHSTIQR SRTCVKFLSR ENRHTPDISA VSFLRAREAS STSGTTETAA 60
SLQSHARKYE GPPYERAVGD IVQRCREELK SIGENNPGLK PTLAIIQAGE DDGLLEMNKK 120
MAGKIGLNVM QICLPHRCTE EEVIEEVLRL NKDSRVHGIF LHLPQTFLSK SVRNAIKPQK 180
DVDGVCDLNV GRVVLGDKTD GFTSPVAGAV LELLAKHDAP LVGKMAVLVG LEGPLKVALQ 240
CLLQNNGMIL QTCRWSSTNL QKQIMDSDVV ITLNTNQNHI PSTWLRPGVA AINLGSALLE 300
EHPDSWEATV EAQSAAGLGP LTAAFRMQHV VRSSRRWIQE QQYQPWNIRP LKLHPLSPVP 360
SDIEISRAQT PKPISQLAQE IGLLPEELEA YGNTKAKVHL SLLNRLQHQP DGRYVLVAGI 420
TPTPLGEGKS TVTIGLAQAL TAHLKLNSFA CLRQPSQGPT FGVKGGAAGG GYAQVIPMEE 480
FNLHLTGDIH AITAANNLVA AAIDARILHE ATQSDKALYS RLVPSVNGVR RFSPIQLARL 540
QRLGINKSNP TDLTPQEVSA FVRLDLDPEK VTWQRVVDTN DRFLRKITIG QANTEKGHAR 600
QTQFDIAVAS EIMAILALTD GLADMRARLG RMVVGSSRNG QAITADDLGV TGALAVLMKD 660
AIKPTLMQTL EGTPVFVHAG PFANIAHGNS SVLADKLALK LVGEEGYVVT EAGFGADIGM 720
EKFFNIKCRT SGLRPNVVVL VATIRALKMH GGGPNVTAGA PLPKEYIEEN LQLVADGCSN 780
LKKQIQIAHL FGVPVVVALN AFKTDTQAEI DLVCRIAKAS GASAAVPCHH WSRGGRGSLE 840
LAHAVKEVAA QGSRFQFLYN LQDPIVEKIR TIAQKVYGAE DIELSSEAQA KIDYYNQQGF 900
GALPICMAKT HLSLSHMPEK KGVPTNFILP IRDVRASIGA GFIYPLVGTM STMPGLPTRP 960
CFYDIDLDPV TEEIKGLF 978

Abbreviation :
CLO : cleft lip only. CPO : cleft palate only. CLP : cleft lip and palate. CL/P : cleft lip with/without cleft palate.
For humans: CL/P, CLO, CPO, and CLP. For mice: CLO, CLP, and CPO.

Protein disorder information

Orthologous information

Relation Gene symbol Entrez ID UniProt ID Cleft type Developmental stage Species Evidence Details
1:1 orthologMTHFD1L102188948A0A452G6W1Capra hircusPredictionMore>>
1:1 orthologMTHFD1L25902B7ZM99Homo sapiensPredictionMore>>
1:1 orthologMthfd1l270685Q3V3R1CPOMus musculusPublicationMore>>
1:1 orthologH2QTW9Pan troglodytesPredictionMore>>
1:1 orthologMTHFD1LF1S7V9Sus scrofaPredictionMore>>
1:1 orthologMthfd1l361472B2GUZ3Rattus norvegicusPredictionMore>>
1:1 orthologmthfd1l100034522F1QQ79Danio rerioPredictionMore>>

Gene ontology

GO ID GO Term
GO:0005829 cytosol
GO:0005524 ATP binding
GO:0004329 formate-tetrahydrofolate ligase activity
GO:0004477 methenyltetrahydrofolate cyclohydrolase activity
GO:0004488 methylenetetrahydrofolate dehydrogenase (NADP+) activity
GO:0035999 tetrahydrofolate interconversion

Functional annotations

Keywords

Keyword ID Keyword Term
KW-0067 ATP-binding
KW-0436 Ligase
KW-0547 Nucleotide-binding
KW-0554 One-carbon metabolism
KW-1267 Proteomics identification
KW-1185 Reference proteome

Interpro

InterPro ID InterPro Term
IPR000559 Formate_THF_ligase
IPR020628 Formate_THF_ligase_CS
IPR036291 NAD(P)-bd_dom_sf
IPR027417 P-loop_NTPase
IPR000672 THF_DH/CycHdrlase
IPR020630 THF_DH/CycHdrlase_cat_dom
IPR020631 THF_DH/CycHdrlase_NAD-bd_dom

PROSITE

PROSITE ID PROSITE Term
PS00721 FTHFS_1
PS00722 FTHFS_2

Pfam

Pfam ID Pfam Term
PF01268 FTHFS
PF00763 THF_DHG_CYH
PF02882 THF_DHG_CYH_C