Gene: Mthfd1l

Basic information

Tag Content
Uniprot ID Q3V3R1; Q3TVQ0; Q3V402; Q80V98; Q8CAL0; Q8K2N5;
Entrez ID 270685
Genbank protein ID AAH30437.1; BAE20438.1; BAC30053.1; AAH49936.1; BAE20500.1; BAE35568.1;
Genbank nucleotide ID NM_001170785.1; NM_001170786.1; NM_172308.4;
Ensembl protein ID ENSMUSP00000036178; ENSMUSP00000112870; ENSMUSP00000112897;
Ensembl nucleotide ID ENSMUSG00000040675
Gene name Monofunctional C1-tetrahydrofolate synthase, mitochondrial
Gene symbol Mthfd1l
Organism Mus musculus
NCBI taxa ID 10090
Cleft type CPO
Developmental stage
Data sources Manually collected
Reference 23267094
Functional description May provide the missing metabolic reaction required to link the mitochondria and the cytoplasm in the mammalian model of one-carbon folate metabolism in embryonic an transformed cells complementing thus the enzymatic activities of MTHFD2.
Sequence
MSVRLPLLLR QLGRQQLPSG PACRLRELCR SGSRSSSSGG GDPEGLRGRR LQDGQTFSSH 60
GPGNPEAPGM DSIVRDVIHN SKEVLSLLQE KNPAFKPVLV VIQAGDDNLM KDMNQNLAKE 120
AGLDITHICL PPDSGEDEII DEILKINEDP RVHGLTLQIS EDSLSNKVLN ALKPEKDVDG 180
VTDINLGKLV RGDAPECFVS PLAKAAVELV EKSGITLDGK KVLVVGAHGP LEAALQWLFQ 240
RKGSMTMSCP WATPQLPDKL READIVVLGS PKPEEIPAVW IPSGTTILNC FHDFLSGKLS 300
GGSPGVPVDK LIAEESVSLL AAALRIQNMV SSGRRWLREQ QHRRWRLHCL KLQPLSPVPS 360
DIEISRGQTP KAVDVLAKEI GLLADEIEIY GKSKAKVQLS LLERLKDQTD GKYVLVAGIT 420
PTPLGEGKST VTIGLVQALT AHLKVNSFAC LRQPSQGPTF GVKGGAAGGG YAQVIPMEEF 480
NLHLTGDIHA ITAANNLLAA AIDTRILHES TQTDKALYNR LVPLVNGVRE FSEIQLSRLK 540
KLGIHKTDPS TLTEEEVRKF ARLNIDPATI TWQRVLDTND RFLRKITIGQ GSTEKGYSRQ 600
AQFDIAVASE IMAVLALTDS LTDMKERLGR MVVASDKDGQ PVTAEDLGVT GALTVLMKDA 660
IKPNLMQTLE GTPVFVHAGP FANIAHGNSS VLADKIALKL VGEEGFVVTE AGFGADIGME 720
KFFNIKCRAS GLVPNVVVLV ATVRALKMHG GGPSVTAGVP LKKEYTEENI QLVADGCCNL 780
QKQIQIAQLF GVPVVVALNV FKTDTRAEID LVCELAKRAG AFDAVPCYHW SAGGKGSVDL 840
ARAVREAANK RSRFQFLYDV QLPIVEKIRV IAQTVYGAKD IELSPEAQSK IDRYTQQGFG 900
NLPICMAKTH LSLSHEPDKK GVPRDFTLPI SDVRASIGAG FIYPLVGTMS TMPGLPTRPC 960
FYDIDLDTET EQVKGLF 977

Abbreviation :
CLO : cleft lip only. CPO : cleft palate only. CLP : cleft lip and palate. CL/P : cleft lip with/without cleft palate.
For humans: CL/P, CLO, CPO, and CLP. For mice: CLO, CLP, and CPO.

Protein structural annotations

3D structure in PDB database


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Protein disorder information

Orthologous information

Relation Gene symbol Entrez ID UniProt ID Cleft type Developmental stage Species Evidence Details
1:1 orthologMTHFD1L102188948A0A452G6W1Capra hircusPredictionMore>>
1:1 orthologMTHFD1L25902B7ZM99Homo sapiensPredictionMore>>
1:1 orthologMthfd1l270685Q3V3R1CPOMus musculusPublicationMore>>
1:1 orthologH2QTW9Pan troglodytesPredictionMore>>
1:1 orthologMTHFD1LF1S7V9Sus scrofaPredictionMore>>
1:1 orthologMthfd1l361472B2GUZ3Rattus norvegicusPredictionMore>>
1:1 orthologmthfd1l100034522F1QQ79Danio rerioPredictionMore>>

Other genetic variants/mutations

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Gene Ontology (GO)/biological pathways

GO:Molecular Function

GO ID GO Term Evidence
GO:0004329 formate-tetrahydrofolate ligase activityISO
GO:0004329 formate-tetrahydrofolate ligase activityIBA
GO:0004488 methylenetetrahydrofolate dehydrogenase (NADP+) activityIEA
GO:0005524 ATP bindingISO
GO:0042803 protein homodimerization activityISO

GO:Biological Process

GO ID GO Term Evidence
GO:0001843 neural tube closureIMP
GO:0006760 folic acid-containing compound metabolic processISO
GO:0009113 purine nucleobase biosynthetic processIBA
GO:0009257 10-formyltetrahydrofolate biosynthetic processISO
GO:0009257 10-formyltetrahydrofolate biosynthetic processIBA
GO:0015942 formate metabolic processISO
GO:0035999 tetrahydrofolate interconversionIEA
GO:0048702 embryonic neurocranium morphogenesisIMP
GO:0048703 embryonic viscerocranium morphogenesisIMP
GO:0055114 oxidation-reduction processIEA

GO:Cellular Component

GO ID GO Term Evidence
GO:0005737 cytoplasmIBA
GO:0005739 mitochondrionISO
GO:0005739 mitochondrionHDA
GO:0005739 mitochondrionIDA
GO:0005739 mitochondrionIBA

Reactome Pathway

Reactome ID Reactome Term Evidence
R-MMU-1430728 MetabolismIEA
R-MMU-196757 Metabolism of folate and pterinesIEA
R-MMU-196849 Metabolism of water-soluble vitamins and cofactorsIEA
R-MMU-196854 Metabolism of vitamins and cofactorsIEA

Functional annotations

Keywords

Keyword ID Keyword Term
KW-0002 3D-structure
KW-0007 Acetylation
KW-0067 ATP-binding
KW-0436 Ligase
KW-0496 Mitochondrion
KW-0547 Nucleotide-binding
KW-0554 One-carbon metabolism
KW-0597 Phosphoprotein
KW-1185 Reference proteome
KW-0809 Transit peptide

Interpro

InterPro ID InterPro Term
IPR000559 Formate_THF_ligase
IPR020628 Formate_THF_ligase_CS
IPR036291 NAD(P)-bd_dom_sf
IPR027417 P-loop_NTPase
IPR000672 THF_DH/CycHdrlase
IPR020630 THF_DH/CycHdrlase_cat_dom
IPR020631 THF_DH/CycHdrlase_NAD-bd_dom

PROSITE

PROSITE ID PROSITE Term
PS00721 FTHFS_1
PS00722 FTHFS_2

Pfam

Pfam ID Pfam Term
PF01268 FTHFS
PF00763 THF_DHG_CYH
PF02882 THF_DHG_CYH_C

Protein-protein interaction

Protein-miRNA interaction