Gene: TCN2

Basic information

Tag Content
Uniprot ID F1RPE4
Entrez ID 100152846
Genbank protein ID HDB11943.1; HDA39736.1; HDA71864.1;
Genbank nucleotide ID XM_005670817.2; XM_005670819.2; XM_005670816.2; NM_001244436.1; XM_005670818.2;
Ensembl protein ID ENSSSCP00000010682
Ensembl nucleotide ID ENSSSCG00000010011
Gene name Transcobalamin-2
Gene symbol TCN2
Organism Sus scrofa
NCBI taxa ID 9823
Cleft type
Developmental stage
Data sources Homology search
Reference
Functional description
Sequence
MGCLGALLLL LGGLGALAWT CEIAKVDSDL VERLGQRLLP WMDRLSPEQL NPSIYVGLRL 60
SGLQAGPKEA HYLHSLKLSY QQSLLRSVSS NDKSDSEAKP SMGQLALYLL ALRANCEFVG 120
SRKGDRLVSQ LKRFLETEKR AIGHNHKGHP HTSYYQYGLS ILALCLHRKR VHDSVVGKLL 180
YAIEHEQHPD LSVDTTAMAG LAFSCLEVSN LNLNQRDRIA LAIQRVQERI LRAQTPEGHF 240
GNVYSTPLAL QFLMTSLKPM EEQGTACLKA KAALLDSLQH KAFQNPLVIS QLLPVLNQKS 300
YVALISPNCQ APKVILETVK ETPSQTQVPE VIHVTLKVPS IFPPYKHSIS VLDGSSLEDV 360
LKKAQEHGRF RYGTQASLSG PYLTSVMGKK AEGPEYWQLL RAPNIPLLQG IADYRPRDGE 420
TIELRLVRW 429

Abbreviation :
CLO : cleft lip only. CPO : cleft palate only. CLP : cleft lip and palate. CL/P : cleft lip with/without cleft palate.
For humans: CL/P, CLO, CPO, and CLP. For mice: CLO, CLP, and CPO.

Protein disorder information

Orthologous information

Relation Gene symbol Entrez ID UniProt ID Cleft type Developmental stage Species Evidence Details
1:1 orthologTCN2281518Q9XSC9Bos taurusPredictionMore>>
1:1 orthologTCN2486355E2RFH1Canis lupus familiarisPredictionMore>>
1:1 orthologTCN2102190723A0A452DSJ0Capra hircusPredictionMore>>
1:1 orthologTCN2100063639F6U5V3Equus caballusPredictionMore>>
1:1 orthologTCN26948P20062Homo sapiensPublicationMore>>
1:1 orthologTcn221452O88968Mus musculusPredictionMore>>
1:1 orthologTCN2470178H2QLH6Pan troglodytesPredictionMore>>
1:1 orthologTCN2100152846F1RPE4Sus scrofaPredictionMore>>
1:1 orthologTcn264365G3V6K1Rattus norvegicusPredictionMore>>
1:1 orthologtcn2407646F2Z4S3Danio rerioPredictionMore>>

Gene ontology

GO ID GO Term
GO:0005615 extracellular space
GO:0031419 cobalamin binding
GO:0015889 cobalamin transport

Functional annotations

Keywords

Keyword ID Keyword Term
KW-1185 Reference proteome
KW-0732 Signal

Interpro

InterPro ID InterPro Term
IPR002157 Cbl-bd_prot
IPR008930 Terpenoid_cyclase/PrenylTrfase

PROSITE

PROSITE ID PROSITE Term

Pfam

Pfam ID Pfam Term
PF01122 Cobalamin_bind