CleftGeneDB-Search

Gene: Gbx2

Basic information

Tag	Content
Uniprot ID	G3V8J6
Entrez ID	114500
Genbank protein ID	EDL92080.1
Genbank nucleotide ID	NM_053708.2
Ensembl protein ID	ENSRNOP00000026419
Ensembl nucleotide ID	ENSRNOG00000019495
Gene name	Gastrulation brain homeobox 2
Gene symbol	Gbx2
Organism	Rattus norvegicus
NCBI taxa ID	10116
Cleft type
Developmental stage
Data sources	Homology search
Reference
Functional description
Sequence	MSAAFPPSLM MMQRPLGSST AFSIDSLIGS PPQPSPGHFV YTGYPMFMPY RPVVLPPPPP 60 PPPALPQAAL QPALPPAHPH HQIPSLPTGF CSSLAQGMAL TSTLMATLPG GFSASPQHQE 120 AAAARKFAPQ PLPGGGNFDK SEALQADTED GKAFLAKEGS LLAFSAAEAV QASLVGAVRG 180 QGKDESKVED DPKGKEESFS LESDVDYSSD DNLPGQTAHK EEDPGHALEE TPQSGGAAGS 240 TTSTGKNRRR RTAFTSEQLL ELEKEFHCKK YLSLTERSQI AHALKLSEVQ VKIWFQNRRA 300 KWKRVKAGNA NSKTGEPSRN PKIVVPIPVH VSRFAIRSQH QQLEQARP 348

Abbreviation :
CLO : cleft lip only. CPO : cleft palate only. CLP : cleft lip and palate. CL/P : cleft lip with/without cleft palate.
For humans: CL/P, CLO, CPO, and CLP. For mice: CLO, CLP, and CPO.

Protein disorder information

Orthologous information

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Relation	Gene symbol	Entrez ID	UniProt ID	Cleft type	Species	Evidence	Details
1:1 ortholog	Gbx2	14472	P48031	CPO	Mus musculus	Publication	More>>
1:1 ortholog	GBX2	486174	E2RC01		Canis lupus familiaris	Prediction	More>>
1:1 ortholog	GBX2	102174804	A0A452EY65		Capra hircus	Prediction	More>>
1:1 ortholog	GBX2	2637	P52951		Homo sapiens	Prediction	More>>
1:1 ortholog	GBX2	470689	H2QJN8		Pan troglodytes	Prediction	More>>
1:1 ortholog	GBX2	100514608	F1SM11		Sus scrofa	Prediction	More>>
1:1 ortholog	GBX2	100353889	G1T4M0		Oryctolagus cuniculus	Prediction	More>>
1:1 ortholog	Gbx2	114500	G3V8J6		Rattus norvegicus	Prediction	More>>
1:1 ortholog	gbx2	245948	Q8QGU1		Danio rerio	Prediction	More>>

Showing 1 to 9 of 9 entries

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Gene ontology

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GO ID	GO Term
GO:0000977	RNA polymerase II regulatory region sequence-specific DNA binding
GO:0000979	RNA polymerase II core promoter sequence-specific DNA binding
GO:0001085	RNA polymerase II transcription factor binding
GO:0001228	DNA-binding transcription activator activity, RNA polymerase II-specific
GO:0001569	branching involved in blood vessel morphogenesis
GO:0001755	neural crest cell migration
GO:0005634	nucleus
GO:0007411	axon guidance
GO:0021549	cerebellum development
GO:0021555	midbrain-hindbrain boundary morphogenesis
GO:0021568	rhombomere 2 development
GO:0021794	thalamus development
GO:0021884	forebrain neuron development
GO:0021930	cerebellar granule cell precursor proliferation
GO:0030902	hindbrain development
GO:0030917	midbrain-hindbrain boundary development
GO:0035239	tube morphogenesis
GO:0042472	inner ear morphogenesis
GO:0045944	positive regulation of transcription by RNA polymerase II
GO:0048483	autonomic nervous system development