Gene: RYK

Basic information

Tag Content
Uniprot ID H2QNE9; A0A2J8QJ40;
Entrez ID 470931
Genbank protein ID
Genbank nucleotide ID XM_016941967.1; XM_016941970.1; XM_016941968.1;
Ensembl protein ID ENSPTRP00000026572
Ensembl nucleotide ID ENSPTRG00000015419
Gene name Receptor like tyrosine kinase
Gene symbol RYK
Organism Pan troglodytes
NCBI taxa ID 9598
Cleft type
Developmental stage
Data sources Homology search
Reference
Functional description
Sequence
MRGAARLGRP GRSCLPGARG LRAPPPPPLL LLLALLPLLP APGAAAAPAP RAPELQSASA 60
GPSVSLYLSE DEVRRLIGLD AELYYVRNDL ISHYALSFNL LVPSETNFLH FTWHAKSKVE 120
YKLGFQVDNV LAMDMPQVNI SVQGEVPRTL SVFRVELSCT GKVDSEVMIL MQLNLTVNSS 180
KNFTVLNFKR RKMCYKKLEE VKTSALDKNT SRTIYDPVHA APTTSTRVFY ISVGVCCAVI 240
FLVAIILAVL HLHSMKRIEL DDSISASSSS QGLSQPSTQT TQYLRADTPN NATPITSSLG 300
YPTLRIEKND LRSVTLLEAK AKVKDIAISR ERITLKDVLQ EGTFGRIFHG ILIDEKDPNK 360
EKQAFVKTVK DQASEIQVTM MLTESCKLRG LHHRNLLPIT HVCIEEGEKP MVILPYMNWG 420
NLKLFLRQCK LVEANNPQAI SQQDLVHMAI QIACGMSYLA RREVIHKDLA ARNCVIDDTL 480
QVKITDNALS RDLFPMDYHC LGDNENRPVR WMALESLVNN EFSSASDVWA FGVTLWELMT 540
LGQTPYVDID PFEMAAYLKD GYRIAQPINC PDELFAVMAC CWALDPEERP KFQQLVQCLT 600
EFHAALGAYV

Abbreviation :
CLO : cleft lip only. CPO : cleft palate only. CLP : cleft lip and palate. CL/P : cleft lip with/without cleft palate.
For humans: CL/P, CLO, CPO, and CLP. For mice: CLO, CLP, and CPO.

Protein disorder information

Orthologous information

Relation Gene symbol Entrez ID UniProt ID Cleft type Developmental stage Species Evidence Details
1:1 orthologRYK102170271A0A452FRV1Capra hircusPredictionMore>>
1:1 orthologRYK6259P34925CPO,CL/PHomo sapiensPublicationMore>>
1:1 orthologRyk20187Q01887CPOE14.5Mus musculusPublicationMore>>
1:1 orthologRYK470931H2QNE9Pan troglodytesPredictionMore>>
1:1 orthologRykF1LQR5Rattus norvegicusPredictionMore>>
1:1 orthologryk558502A2RRV7Danio rerioPredictionMore>>

Gene ontology

GO ID GO Term
GO:0005737 cytoplasm
GO:0005887 integral component of plasma membrane
GO:0005634 nucleus
GO:0043235 receptor complex
GO:0005524 ATP binding
GO:0005109 frizzled binding
GO:0004672 protein kinase activity
GO:0042813 Wnt-activated receptor activity
GO:0017147 Wnt-protein binding
GO:0007409 axonogenesis
GO:0036518 chemorepulsion of dopaminergic neuron axon
GO:0071679 commissural neuron axon guidance
GO:0022038 corpus callosum development
GO:1904948 midbrain dopaminergic neuron differentiation
GO:0007275 multicellular organism development
GO:0048843 negative regulation of axon extension involved in axon guidance
GO:0007399 nervous system development
GO:0018108 peptidyl-tyrosine phosphorylation
GO:1904938 planar cell polarity pathway involved in axon guidance
GO:0033674 positive regulation of kinase activity
GO:0043410 positive regulation of MAPK cascade
GO:0048705 skeletal system morphogenesis
GO:0007169 transmembrane receptor protein tyrosine kinase signaling pathway

Functional annotations

Keywords

Keyword ID Keyword Term
KW-1185 Reference proteome

Interpro

InterPro ID InterPro Term
IPR011009 Kinase-like_dom_sf
IPR000719 Prot_kinase_dom
IPR001245 Ser-Thr/Tyr_kinase_cat_dom
IPR008266 Tyr_kinase_AS
IPR003306 WIF
IPR038677 WIF_sf

PROSITE

PROSITE ID PROSITE Term
PS50011 PROTEIN_KINASE_DOM
PS00109 PROTEIN_KINASE_TYR
PS50814 WIF

Pfam

Pfam ID Pfam Term
PF07714 Pkinase_Tyr
PF02019 WIF