Gene: tgfa

Basic information

Tag Content
Uniprot ID I3ISP4
Entrez ID
Genbank protein ID
Genbank nucleotide ID
Ensembl protein ID ENSDARP00000125933
Ensembl nucleotide ID ENSDARG00000053939
Gene name Transforming growth factor, alpha
Gene symbol tgfa
Organism Danio rerio
NCBI taxa ID 7955
Cleft type
Developmental stage
Data sources Homology search
Reference
Functional description
Sequence
MMYRAFWDTI FLLTGSLFTY GQVQENSTST TTIATTTTTT TTTTTTTTTS TTTTTTTTRV 60
RKFIAAAVHS HFDDCPDSHS HFCFHGTCRF LILEETPACV CHPGFVGMRC EHADLLAVVA 120
SNHRQQTVAT MLVLCVVGSV MLMLICTLLN CWWRRGGCGR GHTLSCWTEK PRSILTSGTS 180
CCNSETVV 188

Abbreviation :
CLO : cleft lip only. CPO : cleft palate only. CLP : cleft lip and palate. CL/P : cleft lip with/without cleft palate.
For humans: CL/P, CLO, CPO, and CLP. For mice: CLO, CLP, and CPO.

Protein disorder information

Orthologous information

Relation Gene symbol Entrez ID UniProt ID Cleft type Developmental stage Species Evidence Details
1:1 orthologTGFA7039P01135CPO,CL/PHomo sapiensPublicationMore>>
1:1 orthologTgfa21802P48030Mus musculusPredictionMore>>
1:1 orthologTGFAH2QI26Pan troglodytesPredictionMore>>
1:1 orthologTGFAF1SLD3Sus scrofaPredictionMore>>
1:1 orthologTgfa24827P01134Rattus norvegicusPredictionMore>>
1:1 orthologtgfaI3ISP4Danio rerioPredictionMore>>

Gene ontology

GO ID GO Term
GO:0005615 extracellular space
GO:0016021 integral component of membrane
GO:0005154 epidermal growth factor receptor binding
GO:0008083 growth factor activity
GO:0000187 activation of MAPK activity
GO:0007173 epidermal growth factor receptor signaling pathway
GO:0008284 positive regulation of cell population proliferation
GO:0045741 positive regulation of epidermal growth factor-activated receptor activity
GO:0045840 positive regulation of mitotic nuclear division

Functional annotations

Keywords

Keyword ID Keyword Term
KW-1015 Disulfide bond
KW-0245 EGF-like domain
KW-0339 Growth factor
KW-0472 Membrane
KW-1185 Reference proteome
KW-0732 Signal
KW-0812 Transmembrane
KW-1133 Transmembrane helix

Interpro

InterPro ID InterPro Term
IPR000742 EGF-like_dom
IPR015497 EGF_rcpt_ligand

PROSITE

PROSITE ID PROSITE Term
PS00022 EGF_1
PS01186 EGF_2
PS50026 EGF_3

Pfam

Pfam ID Pfam Term