Gene: Grem1

Basic information

Tag Content
Uniprot ID O35793
Entrez ID 50566
Genbank protein ID CAA71126.1
Genbank nucleotide ID NM_019282.3
Ensembl protein ID ENSRNOP00000035888
Ensembl nucleotide ID ENSRNOG00000026053
Gene name Gremlin-1
Gene symbol Grem1
Organism Rattus norvegicus
NCBI taxa ID 10116
Cleft type
Developmental stage
Data sources Homology search
Reference
Functional description Cytokine that may play an important role during carcinogenesis and metanephric kidney organogenesis, as a BMP antagonist required for early limb outgrowth and patterning in maintaining the FGF4-SHH feedback loop. Down-regulates the BMP4 signaling in a dose-dependent manner (By similarity). Antagonist of BMP2; inhibits BMP2-mediated differentiation of osteoblasts (in vitro) (By similarity). Acts as inhibitor of monocyte chemotaxis (PubMed:15528323). Can inhibit the growth or viability of normal cells but not transformed cells when is overexpressed.
Sequence
MNRTAYTVGA LLLLLGTLLP AAEGKKKGSQ GAIPPPDKAQ HNDSEQTQSP PQPGSRTRGR 60
GQGRGTAMPG EEVLESSQEA LHVTERKYLK RDWCKTQPLK QTIHEEGCNS RTIINRFCYG 120
QCNSFYIPRH IRKEEGSFQS CSFCKPKKFT TMMVTLNCPE LQPPTKKKRV TRVKQCRCIS 180
IDLD 184

Abbreviation :
CLO : cleft lip only. CPO : cleft palate only. CLP : cleft lip and palate. CL/P : cleft lip with/without cleft palate.
For humans: CL/P, CLO, CPO, and CLP. For mice: CLO, CLP, and CPO.

Protein disorder information

Orthologous information

Relation Gene symbol Entrez ID UniProt ID Cleft type Developmental stage Species Evidence Details
1:1 orthologGREM1539079A2VE87Bos taurusPredictionMore>>
1:1 orthologGREM1A0A452E4N7Capra hircusPredictionMore>>
1:1 orthologGREM126585O60565CL/PHomo sapiensPublicationMore>>
1:1 orthologGrem123892O70326Mus musculusPredictionMore>>
1:1 orthologGREM1A0A287ABW3Sus scrofaPredictionMore>>
1:1 orthologGREM1100342066G1TUM4Oryctolagus cuniculusPredictionMore>>
1:1 orthologGrem150566O35793Rattus norvegicusPredictionMore>>
1:1 orthologgrem1bA0A0R4IYE7Danio rerioPredictionMore>>

Gene ontology

GO ID GO Term
GO:0009986 cell surface
GO:0005615 extracellular space
GO:0036122 BMP binding
GO:0005125 cytokine activity
GO:0042803 protein homodimerization activity
GO:0048018 receptor ligand activity
GO:0030297 transmembrane receptor protein tyrosine kinase activator activity
GO:0043184 vascular endothelial growth factor receptor 2 binding
GO:0001525 angiogenesis
GO:0009887 animal organ morphogenesis
GO:0006915 apoptotic process
GO:0002042 cell migration involved in sprouting angiogenesis
GO:0000902 cell morphogenesis
GO:0007267 cell-cell signaling
GO:0030199 collagen fibril organization
GO:0048263 determination of dorsal identity
GO:0030326 embryonic limb morphogenesis
GO:0043542 endothelial cell migration
GO:0060173 limb development
GO:0003337 mesenchymal to epithelial transition involved in metanephros morphogenesis
GO:0043066 negative regulation of apoptotic process
GO:0030514 negative regulation of BMP signaling pathway
GO:0030502 negative regulation of bone mineralization
GO:1900158 negative regulation of bone mineralization involved in bone maturation
GO:0046851 negative regulation of bone remodeling
GO:1900155 negative regulation of bone trabecula formation
GO:0090090 negative regulation of canonical Wnt signaling pathway
GO:0030308 negative regulation of cell growth
GO:0032331 negative regulation of chondrocyte differentiation
GO:0002689 negative regulation of leukocyte chemotaxis
GO:0090027 negative regulation of monocyte chemotaxis
GO:0045668 negative regulation of osteoblast differentiation
GO:0033689 negative regulation of osteoblast proliferation
GO:0090291 negative regulation of osteoclast proliferation
GO:0060394 negative regulation of pathway-restricted SMAD protein phosphorylation
GO:0045892 negative regulation of transcription, DNA-templated
GO:0045766 positive regulation of angiogenesis
GO:0090190 positive regulation of branching involved in ureteric bud morphogenesis
GO:2000727 positive regulation of cardiac muscle cell differentiation
GO:0008284 positive regulation of cell population proliferation
GO:0051092 positive regulation of NF-kappaB transcription factor activity
GO:1901224 positive regulation of NIK/NF-kappaB signaling
GO:1900086 positive regulation of peptidyl-tyrosine autophosphorylation
GO:0061098 positive regulation of protein tyrosine kinase activity
GO:0002092 positive regulation of receptor internalization
GO:2000273 positive regulation of signaling receptor activity
GO:0051973 positive regulation of telomerase activity
GO:0045944 positive regulation of transcription by RNA polymerase II
GO:0003257 positive regulation of transcription from RNA polymerase II promoter involved in myocardial precursor cell differentiation
GO:0045893 positive regulation of transcription, DNA-templated
GO:0009954 proximal/distal pattern formation
GO:0010717 regulation of epithelial to mesenchymal transition
GO:0051893 regulation of focal adhesion assembly
GO:0007165 signal transduction
GO:0060676 ureteric bud formation

Functional annotations

Keywords

Keyword ID Keyword Term
KW-0202 Cytokine
KW-1015 Disulfide bond
KW-0325 Glycoprotein
KW-1185 Reference proteome
KW-0964 Secreted
KW-0732 Signal

Interpro

InterPro ID InterPro Term
IPR006207 Cys_knot_C
IPR029034 Cystine-knot_cytokine
IPR004133 DAN
IPR017159 Gremlin-1/2

PROSITE

PROSITE ID PROSITE Term

Pfam

Pfam ID Pfam Term
PF03045 DAN