Gene: Gdf11

Basic information

Tag Content
Uniprot ID Q9Z217; G3V6Y2;
Entrez ID 29454
Genbank protein ID AAD05266.1; EDL84790.1;
Genbank nucleotide ID NM_017203.1
Ensembl protein ID ENSRNOP00000010035
Ensembl nucleotide ID ENSRNOG00000007610
Gene name Growth/differentiation factor 11
Gene symbol Gdf11
Organism Rattus norvegicus
NCBI taxa ID 10116
Cleft type
Developmental stage
Data sources Homology search
Reference
Functional description Secreted signal that acts globally to specify positional identity along the anterior/posterior axis during development. May play critical roles in patterning both mesodermal and neural tissues and in establishing the skeletal pattern. Signals through activin receptors type-2, ACVR2A and ACVR2B, and activin receptors type-1, ACVR1B, ACVR1C and TGFBR1 leading to the phosphorylation of SMAD2 and SMAD3.
Sequence
MVLAAPLLLG FLLLALELRP RGEAAEGPAA AAAAAAAAAG VGGERSSRPA PSAAPEPDGC 60
PVCVWRQHSR ELRLESIKSQ ILSKLRLKEA PNISREVVKQ LLPKAPPLQQ ILDLHDFQGD 120
ALQPEDFLEE DEYHATTETV ISMAQETDPA VQTDGSPLCC HFHFSPKVMF TKVLKAQLWV 180
YLRPVPRPAT VYLQILRLKP LTGEGTAGGG GGGRRHIRIR SLKIELHSRS GHWQSIDFKQ 240
VLHSWFRQPQ SNWGIEINAF DPSGTDLAVT SLGPGAEGLH PFMELRVLEN TKRSRRNLGL 300
DCDEHSSESR CCRYPLTVDF EAFGWDWIIA PKRYKANYCS GQCEYMFMQK YPHTHLVQQA 360
NPRGSAGPCC TPTKMSPINM LYFNDKQQII YGKIPGMVVD RCGCS 405

Abbreviation :
CLO : cleft lip only. CPO : cleft palate only. CLP : cleft lip and palate. CL/P : cleft lip with/without cleft palate.
For humans: CL/P, CLO, CPO, and CLP. For mice: CLO, CLP, and CPO.

Protein disorder information

Orthologous information

Relation Gene symbol Entrez ID UniProt ID Cleft type Developmental stage Species Evidence Details
1:1 orthologGDF11J9NYK9Canis lupus familiarisPredictionMore>>
1:1 orthologGDF11102178704A0A452DM24Capra hircusPredictionMore>>
1:1 orthologGDF1110220O95390Homo sapiensPredictionMore>>
1:1 orthologGdf1114561Q9Z1W4CPOMus musculusPublicationMore>>
1:1 orthologGDF11451970H2Q663Pan troglodytesPredictionMore>>
1:1 orthologGDF11F1SPJ6Sus scrofaPredictionMore>>
1:1 orthologGdf1129454Q9Z217Rattus norvegicusPredictionMore>>
1:1 orthologgdf11406247Q8JFP9Danio rerioPredictionMore>>

Gene ontology

GO ID GO Term
GO:0005615 extracellular space
GO:0005654 nucleoplasm
GO:0032991 protein-containing complex
GO:0005125 cytokine activity
GO:0008083 growth factor activity
GO:0009887 animal organ morphogenesis
GO:0009952 anterior/posterior pattern specification
GO:0048593 camera-type eye morphogenesis
GO:0048469 cell maturation
GO:0001656 metanephros development
GO:0045596 negative regulation of cell differentiation
GO:0008285 negative regulation of cell population proliferation
GO:0045665 negative regulation of neuron differentiation
GO:0031016 pancreas development
GO:0010862 positive regulation of pathway-restricted SMAD protein phosphorylation
GO:0060021 roof of mouth development
GO:0001501 skeletal system development
GO:0060395 SMAD protein signal transduction
GO:0021512 spinal cord anterior/posterior patterning
GO:0001657 ureteric bud development

Functional annotations

Keywords

Keyword ID Keyword Term
KW-0165 Cleavage on pair of basic residues
KW-0202 Cytokine
KW-1015 Disulfide bond
KW-0325 Glycoprotein
KW-0339 Growth factor
KW-1185 Reference proteome
KW-0964 Secreted
KW-0732 Signal

Interpro

InterPro ID InterPro Term
IPR029034 Cystine-knot_cytokine
IPR001839 TGF-b_C
IPR001111 TGF-b_propeptide
IPR015615 TGF-beta-rel
IPR017948 TGFb_CS

PROSITE

PROSITE ID PROSITE Term
PS00250 TGF_BETA_1
PS51362 TGF_BETA_2

Pfam

Pfam ID Pfam Term
PF00019 TGF_beta
PF00688 TGFb_propeptide