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Association Linkage Expression Literature GO_Annotation Gene Network miRNA Targets

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Association Linkage Expression Literature GO_Annotation Gene Network miRNA Targets Datasets Gene Ranking

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Gene Page: VIM

Summary

GeneID

7431

Symbol

VIM

Synonyms

FLJ36605

Description

vimentin

Locus tag

RP11-124N14.1

Gene type

protein-coding

Map location

10p13

Gene in Data Sources

Gene set name

Method of gene set

Evidence

Info

Literature

High-throughput literature-search

Co-occurance with Schizophrenia keywords: [schizophrenias, schizophrenic, schizophrenia]

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General Gene Expression (microarray) ?

Gene Expression in Brain Regions (new)

Top co-expressed genes in Brain Regions (new)

Gene

Pearson's Correlation

Spearman's Correlation

Top 10 positively co-expressed genes

FGFR1

0.68

0.58

MTTP

0.65

0.55

VANGL1

0.64

0.59

TMEM47

0.63

0.67

PLEKHG1

0.62

0.54

TNFRSF19

0.62

0.54

CTNNB1

0.61

0.66

LATS2

0.60

0.49

GNS

0.60

0.75

MDFIC

0.60

0.56

Top 10 negatively co-expressed genes

AF347015.31

-0.32

-0.41

MT-CO2

-0.32

-0.41

AF347015.21

-0.31

-0.42

HIGD1B

-0.30

-0.40

AC098691.2

-0.30

-0.48

FXYD1

-0.30

-0.34

CXCL14

-0.30

-0.34

AF347015.33

-0.29

-0.34

AF347015.2

-0.29

-0.35

S100A13

-0.29

-0.36

Gene Ontology

Molecular function

GO term

Evidence

Neuro keywords

PubMed ID

GO:0005515

protein binding

IDA

11889032

GO:0005515

protein binding

IPI

11827972

GO:0005200

structural constituent of cytoskeleton

IDA

11889032

Biological process

GO term

Evidence

Neuro keywords

PubMed ID

GO:0006928

cell motion

TAS

16130169

GO:0044419

interspecies interaction between organisms

IEA

GO:0045103

intermediate filament-based process

IEA

Cellular component

GO term

Evidence

Neuro keywords

PubMed ID

GO:0005856

cytoskeleton

TAS

16130169

GO:0005882

intermediate filament

IDA

11889032

GO:0005737

cytoplasm

IDA

9150946

Protein-protein Interactions

Shown by network

Interactors	Aliases B	Official full name B	Experimental	Source	PubMed ID
ABLIM1	ABLIM \| DKFZp781D0148 \| FLJ14564 \| KIAA0059 \| LIMAB1 \| LIMATIN \| MGC1224	actin binding LIM protein 1	Two-hybrid	BioGRID	16189514
ALS2CR11	FLJ25351 \| FLJ40332	amyotrophic lateral sclerosis 2 (juvenile) chromosome region, candidate 11	Two-hybrid	BioGRID	16189514
APIP	APIP2 \| CGI-29 \| MMRP19 \| dJ179L10.2	APAF1 interacting protein	Two-hybrid	BioGRID	16189514
ARS2	ASR2 \| MGC126427	arsenate resistance protein 2	Two-hybrid	BioGRID	16169070
ATN1	B37 \| D12S755E \| DRPLA \| NOD	atrophin 1	Two-hybrid	BioGRID	16169070
BFSP1	CP115 \| CP94 \| FILENSIN \| LIFL-H	beaded filament structural protein 1, filensin	-	HPRD,BioGRID	1478967 \|1918147
BHLHB2	DEC1 \| SHARP-2 \| STRA13 \| Stra14 \| bHLHe40	basic helix-loop-helix domain containing, class B, 2	Two-hybrid	BioGRID	16169070
BRD1	BRL \| BRPF1 \| BRPF2 \| DKFZp686F0325	bromodomain containing 1	Two-hybrid	BioGRID	16169070
C1orf103	FLJ11269 \| RIF1 \| RP11-96K19.1	chromosome 1 open reading frame 103	Two-hybrid	BioGRID	16169070
C7orf36	GK003	chromosome 7 open reading frame 36	Two-hybrid	BioGRID	16169070
CAPN1	CANP \| CANP1 \| CANPL1 \| muCANP \| muCL	calpain 1, (mu/I) large subunit	CAPN1 interacts with VIM.	BIND	12358155
CASP8	ALPS2B \| CAP4 \| FLICE \| FLJ17672 \| MACH \| MCH5 \| MGC78473	caspase 8, apoptosis-related cysteine peptidase	Two-hybrid	BioGRID	16169070
CDH5	7B4 \| CD144 \| FLJ17376	cadherin 5, type 2 (vascular endothelium)	-	HPRD,BioGRID	12003790
CRCT1	C1orf42 \| NICE-1	cysteine-rich C-terminal 1	Two-hybrid	BioGRID	16169070
CREB1	CREB \| MGC9284	cAMP responsive element binding protein 1	Two-hybrid	BioGRID	16169070
DCTN1	DAP-150 \| DP-150 \| HMN7B \| P135	dynactin 1 (p150, glued homolog, Drosophila)	-	HPRD,BioGRID	14600259
DIS3L2	FAM6A \| FLJ36974 \| MGC42174	DIS3 mitotic control homolog (S. cerevisiae)-like 2	Two-hybrid	BioGRID	16169070
DPPA4	2410091M23Rik \| FLJ10713	developmental pluripotency associated 4	Two-hybrid	BioGRID	16169070
DSP	DPI \| DPII	desmoplakin	-	HPRD,BioGRID	9261168
DYNLL1	DLC1 \| DLC8 \| DNCL1 \| DNCLC1 \| LC8 \| LC8a \| MGC126137 \| MGC126138 \| PIN \| hdlc1	dynein, light chain, LC8-type 1	-	HPRD	14760703
FABP4	A-FABP \| aP2	fatty acid binding protein 4, adipocyte	Two-hybrid	BioGRID	16169070
FAM107A	DRR1 \| FLJ30158 \| FLJ45473 \| TU3A	family with sequence similarity 107, member A	Two-hybrid	BioGRID	16189514
FUBP1	FBP \| FUBP	far upstream element (FUSE) binding protein 1	Two-hybrid	BioGRID	16169070
GFAP	FLJ45472	glial fibrillary acidic protein	Two-hybrid	BioGRID	16189514
GOPC	CAL \| FIG \| GOPC1 \| PIST \| dJ94G16.2	golgi associated PDZ and coiled-coil motif containing	Two-hybrid	BioGRID	16189514
HABP4	IHABP4 \| Ki-1/57 \| MGC825 \| SERBP1L	hyaluronan binding protein 4	Two-hybrid	BioGRID	16169070
HMG20B	BRAF25 \| BRAF35 \| FLJ26127 \| HMGX2 \| PP7706 \| SMARCE1r \| SOXL \| pp8857	high-mobility group 20B	Two-hybrid	BioGRID	16169070
IVNS1ABP	DKFZp686K06216 \| FLARA3 \| FLJ10069 \| FLJ10411 \| FLJ10962 \| FLJ35593 \| FLJ36593 \| HSPC068 \| KIAA0850 \| ND1 \| NS-1 \| NS1-BP \| NS1BP	influenza virus NS1A binding protein	Two-hybrid	BioGRID	16169070
KIAA0408	FLJ43995 \| RP3-403A15.2	KIAA0408	Two-hybrid	BioGRID	16189514
KIF15	FLJ25667 \| HKLP2 \| KNSL7 \| NY-BR-62	kinesin family member 15	Two-hybrid	BioGRID	16169070
KRT20	CD20 \| CK20 \| K20 \| KRT21 \| MGC35423	keratin 20	Two-hybrid	BioGRID	16189514
LOR	MGC111513	loricrin	Two-hybrid	BioGRID	16169070
MAFG	MGC13090 \| MGC20149	v-maf musculoaponeurotic fibrosarcoma oncogene homolog G (avian)	Two-hybrid	BioGRID	16169070
MAN2A2	MANA2X	mannosidase, alpha, class 2A, member 2	Two-hybrid	BioGRID	16169070
MEN1	MEAI \| SCG2	multiple endocrine neoplasia I	menin interacts with vimentin	BIND	12169273
MEN1	MEAI \| SCG2	multiple endocrine neoplasia I	-	HPRD,BioGRID	12169273
MICAL1	DKFZp434B1517 \| FLJ11937 \| FLJ21739 \| MICAL \| MICAL-1 \| NICAL	microtubule associated monoxygenase, calponin and LIM domain containing 1	-	HPRD,BioGRID	11827972
MRPL44	FLJ12701 \| FLJ13990 \| FLJ37688 \| L44MT \| MRP-L44	mitochondrial ribosomal protein L44	Two-hybrid	BioGRID	16169070
MYST2	HBO1 \| HBOA \| KAT7	MYST histone acetyltransferase 2	Two-hybrid	BioGRID	16169070 \|16189514
NFATC2	KIAA0611 \| NFAT1 \| NFATP	nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2	Two-hybrid	BioGRID	16169070
NIF3L1	ALS2CR1 \| CALS-7 \| MDS015	NIF3 NGG1 interacting factor 3-like 1 (S. pombe)	Two-hybrid	BioGRID	16189514
NME2	MGC111212 \| NDPK-B \| NDPKB \| NM23-H2 \| NM23B \| puf	non-metastatic cells 2, protein (NM23B) expressed in	-	HPRD,BioGRID	11082283
NOC4L	MGC3162 \| NOC4	nucleolar complex associated 4 homolog (S. cerevisiae)	Two-hybrid	BioGRID	16189514
NUP85	FLJ12549 \| Nup75	nucleoporin 85kDa	-	HPRD	12706117
OSBP2	ORP-4 \| ORP4 \| OSBPL1 \| OSBPL4	oxysterol binding protein 2	-	HPRD,BioGRID	11802775
PDLIM1	CLIM1 \| CLP-36 \| CLP36 \| hCLIM1	PDZ and LIM domain 1	Two-hybrid	BioGRID	16189514
PKN1	DBK \| MGC46204 \| PAK1 \| PKN \| PKN-ALPHA \| PRK1 \| PRKCL1	protein kinase N1	-	HPRD,BioGRID	9175763
PKP1	B6P \| MGC138829	plakophilin 1 (ectodermal dysplasia/skin fragility syndrome)	-	HPRD,BioGRID	10852826
PLEC1	EBS1 \| EBSO \| HD1 \| PCN \| PLEC1b \| PLTN	plectin 1, intermediate filament binding protein 500kDa	-	HPRD,BioGRID	3027087
PPHLN1	HSPC206 \| HSPC232 \| MGC48786	periphilin 1	-	HPRD	15383276
PPL	KIAA0568 \| MGC134872	periplakin	-	HPRD,BioGRID	12366696
PSMA1	HC2 \| MGC14542 \| MGC14575 \| MGC14751 \| MGC1667 \| MGC21459 \| MGC22853 \| MGC23915 \| NU \| PROS30	proteasome (prosome, macropain) subunit, alpha type, 1	Two-hybrid	BioGRID	16189514
PSME1	IFI5111 \| MGC8628 \| PA28A \| PA28alpha \| REGalpha	proteasome (prosome, macropain) activator subunit 1 (PA28 alpha)	Two-hybrid	BioGRID	16169070
PUF60	FIR \| FLJ31379 \| RoBPI \| SIAHBP1	poly-U binding splicing factor 60KDa	Two-hybrid	BioGRID	16169070
RAB8B	FLJ38125	RAB8B, member RAS oncogene family	-	HPRD,BioGRID	12639940
RABAC1	PRA1 \| PRAF1 \| YIP3	Rab acceptor 1 (prenylated)	Two-hybrid	BioGRID	16169070
RAD51	BRCC5 \| HRAD51 \| HsRad51 \| HsT16930 \| RAD51A \| RECA	RAD51 homolog (RecA homolog, E. coli) (S. cerevisiae)	Two-hybrid	BioGRID	16169070
RIBC2	C22orf11	RIB43A domain with coiled-coils 2	Two-hybrid	BioGRID	16189514
SDCCAG3	NY-CO-3	serologically defined colon cancer antigen 3	Two-hybrid	BioGRID	16169070
SERBP1	CGI-55 \| CHD3IP \| DKFZp564M2423 \| FLJ90489 \| HABP4L \| PAI-RBP1 \| PAIRBP1	SERPINE1 mRNA binding protein 1	Two-hybrid	BioGRID	16169070
SH3YL1	DKFZp586F1318 \| FLJ39121 \| Ray	SH3 domain containing, Ysc84-like 1 (S. cerevisiae)	Two-hybrid	BioGRID	16169070
SIRT6	SIR2L6	sirtuin (silent mating type information regulation 2 homolog) 6 (S. cerevisiae)	Two-hybrid	BioGRID	16169070
SLC25A6	AAC3 \| ANT3 \| ANT3Y \| MGC17525	solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 6	Two-hybrid	BioGRID	16169070
SLC27A6	ACSVL2 \| DKFZp779M0564 \| FACVL2 \| FATP6 \| VLCS-H1	solute carrier family 27 (fatty acid transporter), member 6	Two-hybrid	BioGRID	16169070
STX1A	HPC-1 \| STX1 \| p35-1	syntaxin 1A (brain)	Two-hybrid	BioGRID	16169070
SUMO2	HSMT3 \| MGC117191 \| SMT3B \| SMT3H2	SMT3 suppressor of mif two 3 homolog 2 (S. cerevisiae)	Two-hybrid	BioGRID	16169070
SUMO3	SMT3A \| SMT3H1 \| SUMO-3	SMT3 suppressor of mif two 3 homolog 3 (S. cerevisiae)	Two-hybrid	BioGRID	16169070
SYN1	SYN1a \| SYN1b \| SYNI	synapsin I	Two-hybrid	BioGRID	16169070
TCHP	MGC10854	trichoplein, keratin filament binding	Two-hybrid	BioGRID	16189514
TNFRSF14	ATAR \| HVEA \| HVEM \| LIGHTR \| TR2	tumor necrosis factor receptor superfamily, member 14 (herpesvirus entry mediator)	Two-hybrid	BioGRID	16169070
TRADD	Hs.89862 \| MGC11078	TNFRSF1A-associated via death domain	-	HPRD	14743216
TRIM28	FLJ29029 \| KAP1 \| RNF96 \| TF1B \| TIF1B	tripartite motif-containing 28	Two-hybrid	BioGRID	16169070
TRIM29	ATDC \| FLJ36085	tripartite motif-containing 29	-	HPRD	7644499
TRIOBP	DFNB28 \| FLJ39315 \| HRIHFB2122 \| KIAA1662 \| TARA \| dJ37E16.4	TRIO and F-actin binding protein	Two-hybrid	BioGRID	16169070
TTR	HsT2651 \| PALB \| TBPA	transthyretin	Two-hybrid	BioGRID	16169070
TUBGCP4	76P \| FLJ14797 \| GCP4	tubulin, gamma complex associated protein 4	Two-hybrid	BioGRID	16189514
TXN	DKFZp686B1993 \| MGC61975 \| TRX \| TRX1	thioredoxin	Two-hybrid	BioGRID	12099690
UPP1	UDRPASE \| UP \| UPASE \| UPP	uridine phosphorylase 1	-	HPRD,BioGRID	11278417
UPP2	UDRPASE2 \| UP2 \| UPASE2	uridine phosphorylase 2	-	HPRD,BioGRID	11278417
VIM	FLJ36605	vimentin	-	HPRD,BioGRID	11243787 \|11889032
WBP11	DKFZp779M1063 \| NPWBP \| SIPP1	WW domain binding protein 11	-	HPRD	11375989
XRCC4	-	X-ray repair complementing defective repair in Chinese hamster cells 4	Two-hybrid	BioGRID	16169070
YWHAZ	KCIP-1 \| MGC111427 \| MGC126532 \| MGC138156	tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta polypeptide	-	HPRD,BioGRID	10887173

Pathway annotation

Pathway name	Pathway size	# SZGR genes in pathway	Info
PID_AURORA_B_PATHWAY	39	24	All SZGR genes in this pathway
PID_CASPASE_PATHWAY	52	39	All SZGR genes in this pathway
REACTOME_APOPTOTIC_CLEAVAGE_OF_CELLULAR_PROTEINS	40	26	All SZGR genes in this pathway
REACTOME_CASPASE_MEDIATED_CLEAVAGE_OF_CYTOSKELETAL_PROTEINS	13	11	All SZGR genes in this pathway
REACTOME_STRIATED_MUSCLE_CONTRACTION	27	12	All SZGR genes in this pathway
REACTOME_MUSCLE_CONTRACTION	48	24	All SZGR genes in this pathway
REACTOME_APOPTOSIS	148	94	All SZGR genes in this pathway
REACTOME_APOPTOTIC_EXECUTION_PHASE	54	37	All SZGR genes in this pathway
HOLLMANN_APOPTOSIS_VIA_CD40_DN	267	178	All SZGR genes in this pathway
ZHOU_INFLAMMATORY_RESPONSE_LIVE_UP	485	293	All SZGR genes in this pathway
HOOI_ST7_TARGETS_DN	123	78	All SZGR genes in this pathway
CHARAFE_BREAST_CANCER_LUMINAL_VS_MESENCHYMAL_DN	460	312	All SZGR genes in this pathway
KINSEY_TARGETS_OF_EWSR1_FLII_FUSION_DN	329	219	All SZGR genes in this pathway
RODRIGUES_THYROID_CARCINOMA_POORLY_DIFFERENTIATED_DN	805	505	All SZGR genes in this pathway
OLSSON_E2F3_TARGETS_DN	49	33	All SZGR genes in this pathway
OHASHI_AURKB_TARGETS	10	6	All SZGR genes in this pathway
HONRADO_BREAST_CANCER_BRCA1_VS_BRCA2	18	12	All SZGR genes in this pathway
PATIL_LIVER_CANCER	747	453	All SZGR genes in this pathway
TSUNODA_CISPLATIN_RESISTANCE_UP	15	7	All SZGR genes in this pathway
LIEN_BREAST_CARCINOMA_METAPLASTIC_VS_DUCTAL_UP	83	51	All SZGR genes in this pathway
CALVET_IRINOTECAN_SENSITIVE_VS_REVERTED_UP	5	5	All SZGR genes in this pathway
KHETCHOUMIAN_TRIM24_TARGETS_UP	47	38	All SZGR genes in this pathway
FRIDMAN_SENESCENCE_UP	77	60	All SZGR genes in this pathway
WU_CELL_MIGRATION	184	114	All SZGR genes in this pathway
BENPORATH_NANOG_TARGETS	988	594	All SZGR genes in this pathway
BENPORATH_SOX2_TARGETS	734	436	All SZGR genes in this pathway
JECHLINGER_EPITHELIAL_TO_MESENCHYMAL_TRANSITION_UP	71	51	All SZGR genes in this pathway
DORSAM_HOXA9_TARGETS_UP	35	25	All SZGR genes in this pathway
IIZUKA_LIVER_CANCER_EARLY_RECURRENCE	11	10	All SZGR genes in this pathway
FLECHNER_BIOPSY_KIDNEY_TRANSPLANT_OK_VS_DONOR_UP	555	346	All SZGR genes in this pathway
FERRANDO_T_ALL_WITH_MLL_ENL_FUSION_UP	87	67	All SZGR genes in this pathway
LEI_MYB_TARGETS	318	215	All SZGR genes in this pathway
THEILGAARD_NEUTROPHIL_AT_SKIN_WOUND_DN	225	163	All SZGR genes in this pathway
JIANG_AGING_CEREBRAL_CORTEX_UP	36	27	All SZGR genes in this pathway
WESTON_VEGFA_TARGETS_6HR	59	38	All SZGR genes in this pathway
HARRIS_HYPOXIA	81	64	All SZGR genes in this pathway
KAAB_HEART_ATRIUM_VS_VENTRICLE_UP	249	170	All SZGR genes in this pathway
CUI_TCF21_TARGETS_2_DN	830	547	All SZGR genes in this pathway
WESTON_VEGFA_TARGETS_12HR	35	23	All SZGR genes in this pathway
WESTON_VEGFA_TARGETS	108	71	All SZGR genes in this pathway
APRELIKOVA_BRCA1_TARGETS	49	33	All SZGR genes in this pathway
LU_AGING_BRAIN_UP	262	186	All SZGR genes in this pathway
LEE_AGING_NEOCORTEX_UP	89	59	All SZGR genes in this pathway
RODWELL_AGING_KIDNEY_UP	487	303	All SZGR genes in this pathway
BAELDE_DIABETIC_NEPHROPATHY_DN	434	302	All SZGR genes in this pathway
ZHONG_SECRETOME_OF_LUNG_CANCER_AND_ENDOTHELIUM	66	47	All SZGR genes in this pathway
GAVIN_FOXP3_TARGETS_CLUSTER_T7	98	63	All SZGR genes in this pathway
KYNG_DNA_DAMAGE_DN	195	135	All SZGR genes in this pathway
KYNG_ENVIRONMENTAL_STRESS_RESPONSE_UP	56	41	All SZGR genes in this pathway
TING_SILENCED_BY_DICER	31	17	All SZGR genes in this pathway
ACEVEDO_LIVER_CANCER_UP	973	570	All SZGR genes in this pathway
LABBE_TGFB1_TARGETS_UP	102	64	All SZGR genes in this pathway
BRUECKNER_TARGETS_OF_MIRLET7A3_DN	78	49	All SZGR genes in this pathway
MATTHEWS_AP1_TARGETS	17	12	All SZGR genes in this pathway
BLUM_RESPONSE_TO_SALIRASIB_UP	245	159	All SZGR genes in this pathway
WINTER_HYPOXIA_METAGENE	242	168	All SZGR genes in this pathway
WANG_TUMOR_INVASIVENESS_UP	374	247	All SZGR genes in this pathway
GU_PDEF_TARGETS_UP	71	49	All SZGR genes in this pathway
CHAUHAN_RESPONSE_TO_METHOXYESTRADIOL_DN	102	65	All SZGR genes in this pathway
NUTT_GBM_VS_AO_GLIOMA_UP	46	34	All SZGR genes in this pathway
YOSHIMURA_MAPK8_TARGETS_UP	1305	895	All SZGR genes in this pathway
HINATA_NFKB_TARGETS_KERATINOCYTE_UP	91	63	All SZGR genes in this pathway
HINATA_NFKB_TARGETS_FIBROBLAST_UP	84	60	All SZGR genes in this pathway
CHEN_METABOLIC_SYNDROM_NETWORK	1210	725	All SZGR genes in this pathway
HSIAO_HOUSEKEEPING_GENES	389	245	All SZGR genes in this pathway
MEISSNER_BRAIN_HCP_WITH_H3K4ME3_AND_H3K27ME3	1069	729	All SZGR genes in this pathway
ROME_INSULIN_TARGETS_IN_MUSCLE_UP	442	263	All SZGR genes in this pathway
COULOUARN_TEMPORAL_TGFB1_SIGNATURE_UP	109	68	All SZGR genes in this pathway
LEE_LIVER_CANCER_HEPATOBLAST	16	12	All SZGR genes in this pathway
YAGI_AML_WITH_INV_16_TRANSLOCATION	422	277	All SZGR genes in this pathway
MARSON_FOXP3_TARGETS_UP	66	43	All SZGR genes in this pathway
NGO_MALIGNANT_GLIOMA_1P_LOH	17	13	All SZGR genes in this pathway
LI_INDUCED_T_TO_NATURAL_KILLER_UP	307	182	All SZGR genes in this pathway
MARTENS_TRETINOIN_RESPONSE_DN	841	431	All SZGR genes in this pathway
KIM_ALL_DISORDERS_OLIGODENDROCYTE_NUMBER_CORR_UP	756	494	All SZGR genes in this pathway
KIM_BIPOLAR_DISORDER_OLIGODENDROCYTE_DENSITY_CORR_UP	682	440	All SZGR genes in this pathway
CHICAS_RB1_TARGETS_CONFLUENT	567	365	All SZGR genes in this pathway
PILON_KLF1_TARGETS_DN	1972	1213	All SZGR genes in this pathway
JOHNSTONE_PARVB_TARGETS_3_UP	430	288	All SZGR genes in this pathway
KIM_GLIS2_TARGETS_UP	84	61	All SZGR genes in this pathway
MIKHAYLOVA_OXIDATIVE_STRESS_RESPONSE_VIA_VHL_UP	7	6	All SZGR genes in this pathway
PASINI_SUZ12_TARGETS_DN	315	215	All SZGR genes in this pathway
VANDESLUIS_NORMAL_EMBRYOS_DN	25	13	All SZGR genes in this pathway
BILANGES_RAPAMYCIN_SENSITIVE_VIA_TSC1_AND_TSC2	73	37	All SZGR genes in this pathway
TORCHIA_TARGETS_OF_EWSR1_FLI1_FUSION_DN	321	200	All SZGR genes in this pathway
KOINUMA_TARGETS_OF_SMAD2_OR_SMAD3	824	528	All SZGR genes in this pathway
GOBERT_OLIGODENDROCYTE_DIFFERENTIATION_UP	570	339	All SZGR genes in this pathway
SERVITJA_ISLET_HNF1A_TARGETS_UP	163	111	All SZGR genes in this pathway
WAKABAYASHI_ADIPOGENESIS_PPARG_RXRA_BOUND_36HR	152	88	All SZGR genes in this pathway
KRIEG_HYPOXIA_NOT_VIA_KDM3A	770	480	All SZGR genes in this pathway
HOLLEMAN_VINCRISTINE_RESISTANCE_B_ALL_DN	15	10	All SZGR genes in this pathway
HOLLEMAN_VINCRISTINE_RESISTANCE_ALL_DN	19	11	All SZGR genes in this pathway
LIM_MAMMARY_STEM_CELL_UP	489	314	All SZGR genes in this pathway
LIM_MAMMARY_LUMINAL_MATURE_DN	99	74	All SZGR genes in this pathway

miRNA Targets ?

miRNA family	Target position			miRNA ID	miRNA seq
miRNA family	UTR start	UTR end	Match method	miRNA ID	miRNA seq
miR-124/506	81	87	m8	hsa-miR-506	UAAGGCACCCUUCUGAGUAGA
miR-124/506	81	87	m8	hsa-miR-124^brain	UAAGGCACGCGGUGAAUGCC
miR-138	32	38	1A	hsa-miR-138^brain	AGCUGGUGUUGUGAAUC
miR-30-5p	178	184	1A	hsa-miR-30a-5p	UGUAAACAUCCUCGACUGGAAG
				hsa-miR-30c^brain	UGUAAACAUCCUACACUCUCAGC
				hsa-miR-30d^SZ	UGUAAACAUCCCCGACUGGAAG
				hsa-miR-30b^SZ	UGUAAACAUCCUACACUCAGCU
				hsa-miR-30e-5p	UGUAAACAUCCUUGACUGGA

SZ: miRNAs which differentially expressed in brain cortex of schizophrenia patients comparing with control samples using microarray. Click here to see the list of SZ related miRNAs.
Brain: miRNAs which are expressed in brain based on miRNA microarray expression studies. Click here to see the list of brain related miRNAs.