Gene set: GSMA_IIA

     Gene set description
  • Gene set name: GSMA_IIA
  • Method: genome scan meta-analysis (All samples)
  • Number of genes: 2295
  • Reference: Ng et al. (2008) Meta-analysis of 32 genome-wide linkage studies of schizophrenia. Molecular Psychiatry: 1 - 12
  • Gene set summary: The GSMA_IIA gene set includes 2295 genes from 10 bins that meet an empirical aggregate criterion for genome-wide significance linkage in Ng et al., (2009). It?s consistent of 1640 protein-coding genes and 655 other genes including miscRNA, snoRNA and pseudo genes..
     Gene List

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Sort by   Gene ID   Symbol    Full Name   Location 

Gene ID Symbol Official Full Name Start Site End Site Location
4288MKI67antigen identified by monoclonal antibody Ki-6712978491312981464510q25-qter
3167HMX2H6 family homeobox 212489762812490017810q25.2-q26.3
7390UROSuroporphyrinogen III synthase12746714212750175710q25.2-q26.3
1755DMBT1deleted in malignant brain tumors 112431017112439324210q25.3-q26.1
4942OATornithine aminotransferase (gyrate atrophy)12607586212609744110q26
10570DPYSL4dihydropyrimidinase-like 413385039413386925610q26
51363GALNAC4S-6STB cell RAG associated protein12575717412579623110q26
84435GPR123G protein-coupled receptor 12313475139913479516910q26
4255MGMTO-6-methylguanine-DNA methyltransferase13115545613145535810q26
359770MRPS21P6mitochondrial ribosomal protein S21 pseudogene 612684523612684549910q26
9184BUB3budding uninhibited by benzimidazoles 3 homolog (yeast)12490386012491487110q26
64376IKZF5IKAROS family zinc finger 5 (Pegasus)12474318712475830110q26
8433UTF1undifferentiated embryonic cell transcription factor 113489376813489505210q26
5791PTPREprotein tyrosine phosphatase, receptor type, E12959531512977415510q26
10539GLRX3glutaredoxin 313182465313186786010q26
84504NKX6-2NK6 homeobox 213444831013444952710q26
2263FGFR2fibroblast growth factor receptor 212322784512334796210q26
4945OATL3ornithine aminotransferase-like 3 (pseudogene)12612234312612280210q26
10579TACC2transforming, acidic coiled-coil containing protein 212373867912400404710q26
56647BCCIPBRCA2 and CDKN1A interacting protein12750210512753208010q26.1
387715ARMS2age-related maculopathy susceptibility 212420416912420685810q26.13
729794LOC729794similar to deleted in malignant brain tumors 112447081112450448410q26.13
731940LOC731940similar to hCG204000712455048212456999010q26.13
100124332LOC100124332Y box binding protein 2 pseudogene12574117412574217710q26.13
54764ZRANB1zinc finger, RAN-binding domain containing 112662068212666599510q26.13
228ALDOAP2aldolase A, fructose-bisphosphate pseudogene 212734457912734685310q26.13
36ACADSBacyl-Coenzyme A dehydrogenase, short/branched chain12475841912480779610q26.13
50624CUZD1CUB and zona pellucida-like domains 112458166412459568110q26.13
399814C10orf120chromosome 10 open reading frame 12012444721512444932810q26.13
9679FAM53Bfamily with sequence similarity 53, member B12629785312642292010q26.13
728011LOC728011hypothetical LOC72801112739625812739808410q26.13
642622LOC642622similar to hCG179812612690590712693701210q26.13
54780NSMCE4Anon-SMC element 4 homolog A (S. cerevisiae)12370659312372470010q26.13
100130255LOC100130255hypothetical protein LOC10013025512391185012391388210q26.13
340784HMX3H6 family homeobox 312488555712488723710q26.13
1488CTBP2C-terminal binding protein 212666640812683961410q26.13
59338PLEKHA1pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 112412421012418185610q26.13
119587CPXM2carboxypeptidase X (M14 family), member 212549514212564149010q26.13
64077LHPPphospholysine phosphohistidine inorganic pyrophosphate phosphatase12614040212629269910q26.13
729800LOC729800Putative ZP domain-containing protein LOC72980012456832212457595410q26.13
100132971LOC100132971hypothetical protein LOC10013297112671761312684094310q26.13
196707FLJ12616hypothetical LOC19670712575381012575433410q26.13
100129821LOC100129821hypothetical LOC10012982112621600112621684910q26.13
80007C10orf88chromosome 10 open reading frame 8812468040912470390910q26.13
375940FLJ46361deleted in malignant brain tumors 1 pseudogene12450620012454715110q26.13
399815LOC399815similar to chromosome 10 open reading frame 88; Em:AC073585.512462914112464753310q26.13
118672PSTKphosphoseryl-tRNA kinase12472954612473989610q26.13
11101ATE1arginyltransferase 112349261512367753610q26.13
100132892LOC100132892hypothetical protein LOC10013289212616834312617167810q26.13
390010NKX1-2NK1 homeobox 212612598812612853410q26.13
100131719LOC100131719hypothetical protein LOC10013171912493991012494032310q26.13
100131889LOC100131889hypothetical protein LOC10013188912327396112327643410q26.13
118663BTBD16BTB (POZ) domain containing 1612402081112408766610q26.13
100131885LOC100131885hypothetical protein LOC10013188512333141812334709710q26.13
196792FAM24Bfamily with sequence similarity 24, member B12459860012462914710q26.13
731945LOC731945hypothetical LOC73194512460476212462910410q26.13
118670FAM24Afamily with sequence similarity 24, member A12466020712466261710q26.13
100130887LOC100130887hypothetical protein LOC10013088712367781712370147010q26.13
729426LOC729426hypothetical LOC72942612337311612339857410q26.13
100128168LOC100128168similar to 40S ribosomal protein S2612492095012492215610q26.13
26098C10orf137chromosome 10 open reading frame 13712739807412744270210q26.13-q26.2
1793DOCK1dedicator of cytokinesis 112865895512914077010q26.13-q26.3
728065LOC728065hypothetical LOC72806512848634812857530310q26.2
642938C10orf141chromosome 10 open reading frame 14112882368012888441210q26.2
594857NPSneuropeptide S12923760312924092510q26.2
119467CLRN3clarin 312956610412958120110q26.2
728152LOC728152hypothetical LOC72815212820356812820623910q26.2
92565FANK1fibronectin type III and ankyrin repeat domains 112757509812768815110q26.2
55760DHX32DEAH (Asp-Glu-Ala-His) box polypeptide 3212751489912755987410q26.2
387720LOC387720hypothetical gene supported by AK12764212942281612942552910q26.2
2849GPR26G protein-coupled receptor 2612541586112544411310q26.2
399823FOXI2forkhead box I212942594212942944010q26.2
118611C10orf90chromosome 10 open reading frame 9012810356112820000010q26.2
728154LOC728154hypothetical LOC72815412962285212962442110q26.2
118856MMP21matrix metallopeptidase 2112744501212745438010q26.2
1892ECHS1enoyl Coenzyme A hydratase, short chain, 1, mitochondrial13502598013503689810q26.2-q26.3
119437CTAGEPCTAGE family pseudogene13179426313179709210q26.3
10844TUBGCP2tubulin, gamma complex associated protein 213494312813497263410q26.3
196743PAOXpolyamine oxidase (exo-N4-amino)13504273113505518810q26.3
100128127LOC100128127hypothetical LOC10012812713474946313475012710q26.3
101ADAM8ADAM metallopeptidase domain 813492591113494036210q26.3
118471PRAP1proline-rich acidic protein 113501090113501617710q26.3
100131535LOC100131535similar to ribosomal protein L513480706613482186210q26.3
256536TCERG1Ltranscription elongation regulator 1-like13278064513299997410q26.3
100129103LOC100129103hypothetical protein LOC10012910313145604913146768110q26.3
574448MIRN202microRNA 20213491100513491111410q26.3
100129244LOC100129244similar to mCG12887113452256113459098910q26.3
282974STK32Cserine/threonine kinase 32C13387098613397146710q26.3
118472ZNF511zinc finger protein 51113497241313497665610q26.3
100128830LOC100128830hypothetical protein LOC10012883013418467813418585310q26.3
253738EBF3early B-cell factor 313152353713165208110q26.3
170393C10orf91chromosome 10 open reading frame 9113410870413411181510q26.3
3632INPP5Ainositol polyphosphate-5-phosphatase, 40kDa13420134313444697410q26.3
85442KNDC1kinase non-catalytic C-lobe domain (KIND) containing 113482396113488990610q26.3
27287VENTXVENT homeobox homolog (Xenopus laevis)13490139813490542310q26.3
282969C10orf125chromosome 10 open reading frame 12513501864813502151910q26.3
399829LOC399829FLJ43861 protein13463808513463918310q26.3
92170MTG1mitochondrial GTPase 1 homolog (S. cerevisiae)13505761113508416410q26.3
399827FLJ46300FLJ46300 protein13345788913345836510q26.3
5654HTRA1HtrA serine peptidase 112421104712426441310q26.3

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