Gene: GMCL2

64396
GCL|GMCL1L|GMCL1P1
germ cell-less, spermatogenesis associated 2
protein-coding
5q35.3
Ensembl:ENSG00000244234 UniprotKB:Q8NEA9
NC_000005.10
SNP Mapped
5   ANCO-SNPs
AD
0   
NA (AD)  NA (ND)   (Frontal_Cortex)
2.290e-6 (AD)  4.459e-1 (ND)

ANCO-SNPs

SNP ID Position Alleles Trait Variation Type
rs2961663chr5:178186543 (GRCh38.p7)C>G / C>Talcohol dependenceSNV(Single Nucleotide Variation)
rs7715618chr5:178185633 (GRCh38.p7)A>Calcohol dependenceSNV(Single Nucleotide Variation)
rs7719717chr5:178185292 (GRCh38.p7)T>Galcohol dependenceSNV(Single Nucleotide Variation)
rs7380658chr5:178185033 (GRCh38.p7)G>Talcohol dependenceSNV(Single Nucleotide Variation)
rs9329136chr5:178184647 (GRCh38.p7)G>Aalcohol dependenceSNV(Single Nucleotide Variation)

DNA Methylation

There is no related methylation information for this gene.

Gene Expression in Different Tissues

Temporal and Spatial Expressions (BrainSpan)

Footnote:
SC: sub-cortical regions; SM: sensory-motor regions; FC: frontal cortex; and TP: temporal-parietal cortex
ST1: fetal (13 - 26 postconception weeks), ST2: early infancy to late childhood (4 months to 11 years), and ST3: adolescence to adulthood (13 - 23 years)
The bar shown representes average value of the expressions.

Drugs/Compounds

    There is no DrugBank record for this gene !

ID Drug Name Action PubMed
D014635Valproic AcidValproic Acid results in increased methylation of GMCL2 gene29154799

GO/Pathway

GO ID GO Term Qualifier Evidence PubMed
GO:0005515protein binding-IPI16189514  25416956  
GO ID GO Term Qualifier Evidence PubMed
GO:0007275multicellular organism development-IEA-  
GO:0007283spermatogenesis-IEA-  
GO:0016567protein ubiquitination-IEA-  
GO:0030154cell differentiation-IEA-  
GO ID GO Term Qualifier Evidence PubMed
GO:0016363nuclear matrix-IEA-  
KEGG ID KEGG Term
Reactome ID Reactome Term Evidence

Interactions (STRING v10.5, Interaction Score >= 0.400)

There is no Interaction data for this gene.

Publications (Co-occurrence of gene symbol strings and ANCO-Dependence terms)

PMID Title (Year) Author Journal