DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
AADTTPRK
Uniprot ID:
A8CG34
Source protein:
Nuclear envelope pore membrane protein POM 121C
Source gene:
POM121C
Class:
DEG_SCF_SKP2-CKS1_1
Location:
458:465
E3 ligase:
SKP2,CSK1
DEGRON score:
0.5453
ASA_SCORE:
94.55
COIL:
0.8878
CONS_SCORE:
0.5773
DSS_SCORE:
0.8194
HELIX:
0.0924
FCONS_SCORE:
0.8785
RIG_SCORE:
0.623
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.P448L
TCGA-EE-A2MS
SKCM
TCGA
AADTTPRK
DEG_SCF_SKP2-CKS1_1
0.0556
p.S453F
DO222450
ESCA
ICGC
AADTTPRK
DEG_SCF_SKP2-CKS1_1
0.6389
p.A448V
DO41235
UCEC
ICGC
AADTTPRK
DEG_SCF_SKP2-CKS1_1
0.0556
p.K472T
SIDM01126
Small Cell Lung Carcinoma
GDSC
AADTTPRK
DEG_SCF_SKP2-CKS1_1
0.1389
p.K472T
SIDM00694
Other Solid Cancers
GDSC
AADTTPRK
DEG_SCF_SKP2-CKS1_1
0.1389
p.K472T
SIDM00954
Breast Carcinoma
GDSC
AADTTPRK
DEG_SCF_SKP2-CKS1_1
0.1389
p.K472T
HUTU-80
small_intestine
COSMIC
AADTTPRK
DEG_SCF_SKP2-CKS1_1
0.1389
p.P470S
COLO-792
skin
COSMIC
AADTTPRK
DEG_SCF_SKP2-CKS1_1
0.1944
Drug responses associated with POM121C mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of AADTTPRK
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
A8CG34
Nuclear envelope pore membrane protein POM 121C
DEG_SCF_SKP2-CKS1_1
458:465
AADTTPRK
SKP2,CSK1
0.5453
More...
Q96HA1
Nuclear envelope pore membrane protein POM 121
DEG_SCF_SKP2-CKS1_1
481:488
AADTTPRK
SKP2,CSK1
0.7141
More...
A6NF01
Putative nuclear envelope pore membrane protein POM 121B
DEG_SCF_SKP2-CKS1_1
65:72
AADTTPRK
SKP2,CSK1
0.8757
More...