DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
AADTTPRK
Uniprot ID:
Q96HA1
Source protein:
Nuclear envelope pore membrane protein POM 121
Source gene:
POM121
Class:
DEG_SCF_SKP2-CKS1_1
Location:
481:488
E3 ligase:
SKP2,CSK1
DEGRON score:
0.7141
ASA_SCORE:
94.3875
COIL:
0.8578
CONS_SCORE:
0.5378
DSS_SCORE:
0.8301
HELIX:
0.1141
FCONS_SCORE:
0.8673
RIG_SCORE:
0.6194
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.A489V
TCGA-AX-A1C5
UCEC
TCGA
AADTTPRK
DEG_SCF_SKP2-CKS1_1
0.3056
p.A489V
TCGA-B5-A0K9
UCEC
TCGA
AADTTPRK
DEG_SCF_SKP2-CKS1_1
0.3056
p.A489V
DO42097
UCEC
ICGC
AADTTPRK
DEG_SCF_SKP2-CKS1_1
0.3056
p.A489V
DO41422
UCEC
ICGC
AADTTPRK
DEG_SCF_SKP2-CKS1_1
0.3056
p.T488I
TCGA-CK-4951
COAD
TCGA
AADTTPRK
DEG_SCF_SKP2-CKS1_1
0.7078
p.T488I
DO10582
COAD
ICGC
AADTTPRK
DEG_SCF_SKP2-CKS1_1
0.7078
p.P480L
TCGA-EE-A3AC
SKCM
TCGA
AADTTPRK
DEG_SCF_SKP2-CKS1_1
0.3056
p.P480L
SIDM00826
Colorectal Carcinoma
GDSC
AADTTPRK
DEG_SCF_SKP2-CKS1_1
0.3056
p.P480L
SIDM00823
Colorectal Carcinoma
GDSC
AADTTPRK
DEG_SCF_SKP2-CKS1_1
0.3056
p.A487T
TCGA-IB-7651
PAAD
TCGA
AADTTPRK
DEG_SCF_SKP2-CKS1_1
0.7139
p.A487T
DO46657
PAAD
ICGC
AADTTPRK
DEG_SCF_SKP2-CKS1_1
0.7139
p.E474Q
TCGA-ZF-AA51
BLCA
TCGA
AADTTPRK
DEG_SCF_SKP2-CKS1_1
0.1389
p.E474Q
DO219093
BLCA
ICGC
AADTTPRK
DEG_SCF_SKP2-CKS1_1
0.1389
p.P498L
DO219335
PRAD
ICGC
AADTTPRK
DEG_SCF_SKP2-CKS1_1
0.0556
p.P481L
SIDM01114
Non-Cancerous
GDSC
AADTTPRK
DEG_SCF_SKP2-CKS1_1
0.7582
p.E474K
SIDM00528
Breast Carcinoma
GDSC
AADTTPRK
DEG_SCF_SKP2-CKS1_1
0.1389
p.E474K
MDA-MB-361
breast
COSMIC
AADTTPRK
DEG_SCF_SKP2-CKS1_1
0.1389
p.P478L
RXF393
kidney
COSMIC
AADTTPRK
DEG_SCF_SKP2-CKS1_1
0.25
p.P478L
IPC-298
skin
COSMIC
AADTTPRK
DEG_SCF_SKP2-CKS1_1
0.25
p.P478L
MPP-89
pleura
COSMIC
AADTTPRK
DEG_SCF_SKP2-CKS1_1
0.25
p.P478L
LCLC-103H
lung
COSMIC
AADTTPRK
DEG_SCF_SKP2-CKS1_1
0.25
p.P478L
G-MEL
skin
COSMIC
AADTTPRK
DEG_SCF_SKP2-CKS1_1
0.25
p.P478L
SIG-M5
haematopoietic_and_lymphoid_tissue
COSMIC
AADTTPRK
DEG_SCF_SKP2-CKS1_1
0.25
p.P478L
CAL-29
urinary_tract
COSMIC
AADTTPRK
DEG_SCF_SKP2-CKS1_1
0.25
p.P478L
NCI-H1105
lung
COSMIC
AADTTPRK
DEG_SCF_SKP2-CKS1_1
0.25
p.P478L
NCI-H720
lung
COSMIC
AADTTPRK
DEG_SCF_SKP2-CKS1_1
0.25
p.P478L
NCI-H716
large_intestine
COSMIC
AADTTPRK
DEG_SCF_SKP2-CKS1_1
0.25
p.P478L
RS4-11
haematopoietic_and_lymphoid_tissue
COSMIC
AADTTPRK
DEG_SCF_SKP2-CKS1_1
0.25
p.P478L
SU-DHL-8
NS
COSMIC
AADTTPRK
DEG_SCF_SKP2-CKS1_1
0.25
p.A472V
SW156
kidney
COSMIC
AADTTPRK
DEG_SCF_SKP2-CKS1_1
0.0833
p.A472V
SNU-1040
large_intestine
COSMIC
AADTTPRK
DEG_SCF_SKP2-CKS1_1
0.0833
p.R474K
NCI-H1417
lung
COSMIC
AADTTPRK
DEG_SCF_SKP2-CKS1_1
0.1389
Drug responses associated with POM121 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of AADTTPRK
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
A8CG34
Nuclear envelope pore membrane protein POM 121C
DEG_SCF_SKP2-CKS1_1
458:465
AADTTPRK
SKP2,CSK1
0.5453
More...
Q96HA1
Nuclear envelope pore membrane protein POM 121
DEG_SCF_SKP2-CKS1_1
481:488
AADTTPRK
SKP2,CSK1
0.7141
More...
A6NF01
Putative nuclear envelope pore membrane protein POM 121B
DEG_SCF_SKP2-CKS1_1
65:72
AADTTPRK
SKP2,CSK1
0.8757
More...