DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
CPH
CGC
Degron:
ALTST
Uniprot ID:
Q14028
Source protein:
Cyclic nucleotide-gated cation channel beta-1
Source gene:
CNGB1
Class:
DEG_SPOP_SBC_1
Location:
78:82
E3 ligase:
SPOP
DEGRON score:
0.9355
ASA_SCORE:
71.44
COIL:
0.693
CONS_SCORE:
0.3939
DSS_SCORE:
0.5665
HELIX:
0.2564
FCONS_SCORE:
0.9998
RIG_SCORE:
0.7648
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.T74N
TCGA-29-1770
OV
TCGA
ALTST
DEG_SPOP_SBC_1
0.2222
p.T74N
DO31664
OV
ICGC
ALTST
DEG_SPOP_SBC_1
0.2222
p.S81Y
TCGA-60-2698
LUSC
TCGA
ALTST
DEG_SPOP_SBC_1
0.712
p.S81Y
DO26469
LUSC
ICGC
ALTST
DEG_SPOP_SBC_1
0.712
p.S70N
TCGA-EO-A22X
UCEC
TCGA
ALTST
DEG_SPOP_SBC_1
0.1111
p.S70N
DO43907
UCEC
ICGC
ALTST
DEG_SPOP_SBC_1
0.1111
p.A90T
TCGA-F6-A8O3
LGG
TCGA
ALTST
DEG_SPOP_SBC_1
0.1111
p.A90T
DO51823
LGG
ICGC
ALTST
DEG_SPOP_SBC_1
0.1111
p.K75N
TCGA-GN-A262
SKCM
TCGA
ALTST
DEG_SPOP_SBC_1
0.3611
p.K75N
DO37515
SKCM
ICGC
ALTST
DEG_SPOP_SBC_1
0.3611
p.P69S
TCGA-IB-7651
PAAD
TCGA
ALTST
DEG_SPOP_SBC_1
0.0833
p.P69S
DO46657
PAAD
ICGC
ALTST
DEG_SPOP_SBC_1
0.0833
p.T74S
DO222412
BTCA
ICGC
ALTST
DEG_SPOP_SBC_1
0.2222
p.A87T
DO234282
ESAD
ICGC
ALTST
DEG_SPOP_SBC_1
0.1944
p.T82S
DO228574
LICA
ICGC
ALTST
DEG_SPOP_SBC_1
0.6005
p.S84F
DO220899
MELA
ICGC
ALTST
DEG_SPOP_SBC_1
0.2778
p.S84F
DO229470
SKCA
ICGC
ALTST
DEG_SPOP_SBC_1
0.2778
p.R86Q
DO228012
SKCA
ICGC
ALTST
DEG_SPOP_SBC_1
0.2222
p.A78T
SIDM01765
Osteosarcoma
GDSC
ALTST
DEG_SPOP_SBC_1
0.7139
Drug responses associated with CNGB1 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of ALTST
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q14028
Cyclic nucleotide-gated cation channel beta-1
DEG_SPOP_SBC_1
78:82
ALTST
SPOP
0.9355
More...
Q86UD0
Suppressor APC domain-containing protein 2
DEG_SPOP_SBC_1
326:330
ALTST
SPOP
0.9935
More...
Q9BVL2
Nucleoporin p58/p45
DEG_SPOP_SBC_1
139:143
ALTST
SPOP
0.9749
More...