DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
CKENE
Uniprot ID:
Q5VT06
Source protein:
Centrosome-associated protein 350
Source gene:
CEP350
Class:
DEG_APCC_KENBOX_2
Location:
1557:1561
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.951
ASA_SCORE:
104.56
COIL:
0.7186
CONS_SCORE:
0.4337
DSS_SCORE:
0.6615
HELIX:
0.235
FCONS_SCORE:
0.994
RIG_SCORE:
0.6527
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.Q1549R
TCGA-56-6545
LUSC
TCGA
CKENE
DEG_APCC_KENBOX_2
0.1111
p.Q1549R
DO26532
LUSC
ICGC
CKENE
DEG_APCC_KENBOX_2
0.1111
p.P1555S
TCGA-D3-A51G
SKCM
TCGA
CKENE
DEG_APCC_KENBOX_2
0.2778
p.P1555S
DO47700
SKCM
ICGC
CKENE
DEG_APCC_KENBOX_2
0.2778
p.P1555L
TCGA-D9-A6EC
SKCM
TCGA
CKENE
DEG_APCC_KENBOX_2
0.2778
p.P1555L
DO50291
SKCM
ICGC
CKENE
DEG_APCC_KENBOX_2
0.2778
p.K1568N
TCGA-ZF-AA4X
BLCA
TCGA
CKENE
DEG_APCC_KENBOX_2
0.25
p.K1568N
DO219091
BLCA
ICGC
CKENE
DEG_APCC_KENBOX_2
0.25
p.K1568N
SIDM00992
Thyroid Gland Carcinoma
GDSC
CKENE
DEG_APCC_KENBOX_2
0.25
p.K1568N
ACH-000456
Thyroid Cancer
CCLE
CKENE
DEG_APCC_KENBOX_2
0.25
p.K1568N
BCPAP
thyroid
COSMIC
CKENE
DEG_APCC_KENBOX_2
0.25
p.P1552L
SIDM00149
Melanoma
GDSC
CKENE
DEG_APCC_KENBOX_2
0.1944
p.P1552L
ACH-000750
Skin Cancer
CCLE
CKENE
DEG_APCC_KENBOX_2
0.1944
p.P1552L
LOXIMVI
skin
COSMIC
CKENE
DEG_APCC_KENBOX_2
0.1944
Drug responses associated with CEP350 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of CKENE
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q5VT06
Centrosome-associated protein 350
DEG_APCC_KENBOX_2
1557:1561
CKENE
APC,CDC20,FZR1
0.951
More...
Q86UL8
Membrane-associated guanylate kinase, WW and PDZ domain-containing protein 2
DEG_APCC_KENBOX_2
345:349
CKENE
APC,CDC20,FZR1
0.5557
More...
Q9BRU2
Transcription elongation factor A protein-like 7
DEG_APCC_KENBOX_2
5:9
CKENE
APC,CDC20,FZR1
0.7442
More...