DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
DSGSES
Uniprot ID:
A3KN83
Source protein:
Protein strawberry notch homolog 1
Source gene:
SBNO1
Class:
DEG_SCF_TRCP1_1
Location:
732:737
E3 ligase:
BTRC
DEGRON score:
0.9559
ASA_SCORE:
79.8333
COIL:
0.87
CONS_SCORE:
0.3246
DSS_SCORE:
0.744
HELIX:
0.0965
FCONS_SCORE:
1.0432
RIG_SCORE:
0.5175
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.E744K
TCGA-77-8136
LUSC
TCGA
DSGSES
DEG_SCF_TRCP1_1
0.1389
p.E744K
DO26593
LUSC
ICGC
DSGSES
DEG_SCF_TRCP1_1
0.1389
p.N742S
TCGA-BQ-7059
KIRP
TCGA
DSGSES
DEG_SCF_TRCP1_1
0.1944
p.N742S
DO20932
KIRP
ICGC
DSGSES
DEG_SCF_TRCP1_1
0.1944
p.Y747C
TCGA-CG-5721
STAD
TCGA
DSGSES
DEG_SCF_TRCP1_1
0.0556
p.Y747C
DO38192
STAD
ICGC
DSGSES
DEG_SCF_TRCP1_1
0.0556
p.G723S
TCGA-D3-A51R
SKCM
TCGA
DSGSES
DEG_SCF_TRCP1_1
0.0833
p.G723S
DO47480
SKCM
ICGC
DSGSES
DEG_SCF_TRCP1_1
0.0833
p.G724D
DO233869
GACA
ICGC
DSGSES
DEG_SCF_TRCP1_1
0.1111
p.A739D
DO228948
LICA
ICGC
DSGSES
DEG_SCF_TRCP1_1
0.2778
p.D731E
DO229019
LICA
ICGC
DSGSES
DEG_SCF_TRCP1_1
0.3056
Drug responses associated with SBNO1 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of DSGSES
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
O14646
Chromodomain-helicase-DNA-binding protein 1
DEG_SCF_TRCP1_1
53:58
DSGSES
BTRC
0.9873
More...
Q96MU7
YTH domain-containing protein 1
DEG_SCF_TRCP1_1
272:277
DSGSES
BTRC
0.951
More...
A3KN83
Protein strawberry notch homolog 1
DEG_SCF_TRCP1_1
732:737
DSGSES
BTRC
0.9559
More...