DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
DSGSES
Uniprot ID:
Q96MU7
Source protein:
YTH domain-containing protein 1
Source gene:
YTHDC1
Class:
DEG_SCF_TRCP1_1
Location:
272:277
E3 ligase:
BTRC
DEGRON score:
0.951
ASA_SCORE:
88.9
COIL:
0.9292
CONS_SCORE:
0.2775
DSS_SCORE:
0.6887
HELIX:
0.0542
FCONS_SCORE:
0.8416
RIG_SCORE:
0.5467
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.R267Q
TCGA-AA-3984
COAD
TCGA
DSGSES
DEG_SCF_TRCP1_1
0.1944
p.R267Q
TCGA-AG-A002
READ
TCGA
DSGSES
DEG_SCF_TRCP1_1
0.1944
p.R267Q
TCGA-EO-A22X
UCEC
TCGA
DSGSES
DEG_SCF_TRCP1_1
0.1944
p.R267Q
DO9002
COAD
ICGC
DSGSES
DEG_SCF_TRCP1_1
0.1944
p.R267Q
DO43907
UCEC
ICGC
DSGSES
DEG_SCF_TRCP1_1
0.1944
p.D263G
TCGA-AA-A00N
COAD
TCGA
DSGSES
DEG_SCF_TRCP1_1
0.0833
p.D263G
DO9876
COAD
ICGC
DSGSES
DEG_SCF_TRCP1_1
0.0833
p.D263Y
TCGA-AP-A056
UCEC
TCGA
DSGSES
DEG_SCF_TRCP1_1
0.0833
p.D263Y
DO43971
UCEC
ICGC
DSGSES
DEG_SCF_TRCP1_1
0.0833
p.D282Y
TCGA-AX-A2HC
UCEC
TCGA
DSGSES
DEG_SCF_TRCP1_1
0.1944
p.D282Y
DO224600
BRCA
ICGC
DSGSES
DEG_SCF_TRCP1_1
0.1944
p.D282Y
DO1011
BRCA
ICGC
DSGSES
DEG_SCF_TRCP1_1
0.1944
p.D282Y
DO41572
UCEC
ICGC
DSGSES
DEG_SCF_TRCP1_1
0.1944
p.Y264C
TCGA-IS-A3K8
SARC
TCGA
DSGSES
DEG_SCF_TRCP1_1
0.5556
p.Y264C
DO220170
SARC
ICGC
DSGSES
DEG_SCF_TRCP1_1
0.5556
p.S271G
TCGA-UY-A9PB
BLCA
TCGA
DSGSES
DEG_SCF_TRCP1_1
0.3056
p.S271G
DO219041
BLCA
ICGC
DSGSES
DEG_SCF_TRCP1_1
0.3056
p.D272V
SIDM00250
Esophageal Squamous Cell Carcinoma
GDSC
DSGSES
DEG_SCF_TRCP1_1
0.7785
p.D272V
ACH-000917
Esophageal Cancer
CCLE
DSGSES
DEG_SCF_TRCP1_1
0.7785
p.D272V
TE-4
oesophagus
COSMIC
DSGSES
DEG_SCF_TRCP1_1
0.7785
Drug responses associated with YTHDC1 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of DSGSES
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
O14646
Chromodomain-helicase-DNA-binding protein 1
DEG_SCF_TRCP1_1
53:58
DSGSES
BTRC
0.9873
More...
Q96MU7
YTH domain-containing protein 1
DEG_SCF_TRCP1_1
272:277
DSGSES
BTRC
0.951
More...
A3KN83
Protein strawberry notch homolog 1
DEG_SCF_TRCP1_1
732:737
DSGSES
BTRC
0.9559
More...