DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
DSGSES
Uniprot ID:
O14646
Source protein:
Chromodomain-helicase-DNA-binding protein 1
Source gene:
CHD1
Class:
DEG_SCF_TRCP1_1
Location:
53:58
E3 ligase:
BTRC
DEGRON score:
0.9873
ASA_SCORE:
96.65
COIL:
0.9603
CONS_SCORE:
0.2838
DSS_SCORE:
0.7798
HELIX:
0.0293
FCONS_SCORE:
1.1911
RIG_SCORE:
0.4106
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.D67E
DO229029
LICA
ICGC
DSGSES
DEG_SCF_TRCP1_1
0.0833
p.D67E
DO229037
LICA
ICGC
DSGSES
DEG_SCF_TRCP1_1
0.0833
p.S54C
SIDM01259
B-Lymphoblastic Leukemia
GDSC
DSGSES
DEG_SCF_TRCP1_1
0.7541
p.S54C
ACH-001669
Leukemia
CCLE
DSGSES
DEG_SCF_TRCP1_1
0.7541
p.S54C
ACH-002238
Leukemia
CCLE
DSGSES
DEG_SCF_TRCP1_1
0.7541
p.S54C
GR-ST
haematopoietic_and_lymphoid_tissue
COSMIC
DSGSES
DEG_SCF_TRCP1_1
0.7541
Drug responses associated with CHD1 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of DSGSES
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
O14646
Chromodomain-helicase-DNA-binding protein 1
DEG_SCF_TRCP1_1
53:58
DSGSES
BTRC
0.9873
More...
Q96MU7
YTH domain-containing protein 1
DEG_SCF_TRCP1_1
272:277
DSGSES
BTRC
0.951
More...
A3KN83
Protein strawberry notch homolog 1
DEG_SCF_TRCP1_1
732:737
DSGSES
BTRC
0.9559
More...