DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
CPH
CGC
Degron:
DSGVDT
Uniprot ID:
Q8ND56
Source protein:
Protein LSM14 homolog A
Source gene:
LSM14A
Class:
DEG_SCF_TRCP1_1
Location:
339:344
E3 ligase:
BTRC
DEGRON score:
0.9941
ASA_SCORE:
75.5333
COIL:
0.8525
CONS_SCORE:
0.3122
DSS_SCORE:
0.747
HELIX:
0.0898
FCONS_SCORE:
1.1088
RIG_SCORE:
0.6028
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.G334S
TCGA-D6-6516
HNSC
TCGA
DSGVDT
DEG_SCF_TRCP1_1
0.1944
p.G334S
DO15623
HNSC
ICGC
DSGVDT
DEG_SCF_TRCP1_1
0.1944
p.E335D
DO46432
OV
ICGC
DSGVDT
DEG_SCF_TRCP1_1
0.2222
Drug responses associated with LSM14A mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of DSGVDT
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q8ND56
Protein LSM14 homolog A
DEG_SCF_TRCP1_1
339:344
DSGVDT
BTRC
0.9941
More...
Q92870
Amyloid beta precursor protein binding family B member 2
DEG_SCF_TRCP1_1
8:13
DSGVDT
BTRC
0.924
More...
Q9UQ26
Regulating synaptic membrane exocytosis protein 2
DEG_SCF_TRCP1_1
622:627
DSGVDT
BTRC
0.9851
More...