DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
DSGVDT
Uniprot ID:
Q92870
Source protein:
Amyloid beta precursor protein binding family B member 2
Source gene:
APBB2
Class:
DEG_SCF_TRCP1_1
Location:
8:13
E3 ligase:
BTRC
DEGRON score:
0.924
ASA_SCORE:
77.8167
COIL:
0.8045
CONS_SCORE:
0.3244
DSS_SCORE:
0.4123
HELIX:
0.1593
FCONS_SCORE:
0.8665
RIG_SCORE:
0.749
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.F17C
TCGA-BS-A0UF
UCEC
TCGA
DSGVDT
DEG_SCF_TRCP1_1
0.2222
p.F17C
DO41488
UCEC
ICGC
DSGVDT
DEG_SCF_TRCP1_1
0.2222
p.A15T
DO223071
ESCA
ICGC
DSGVDT
DEG_SCF_TRCP1_1
0.2778
p.A15V
DO233908
GACA
ICGC
DSGVDT
DEG_SCF_TRCP1_1
0.2778
p.S14P
DO51420
PRAD
ICGC
DSGVDT
DEG_SCF_TRCP1_1
0.3056
p.L23F
DO51286
SKCM
ICGC
DSGVDT
DEG_SCF_TRCP1_1
0.0556
p.T13A
SIDM02026
Colorectal Carcinoma
GDSC
DSGVDT
DEG_SCF_TRCP1_1
0.7139
p.D12G
SIDM01519
Head and Neck Carcinoma
GDSC
DSGVDT
DEG_SCF_TRCP1_1
0.6087
p.A7V
OVISE
ovary
COSMIC
DSGVDT
DEG_SCF_TRCP1_1
0.3056
Drug responses associated with APBB2 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of DSGVDT
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q8ND56
Protein LSM14 homolog A
DEG_SCF_TRCP1_1
339:344
DSGVDT
BTRC
0.9941
More...
Q92870
Amyloid beta precursor protein binding family B member 2
DEG_SCF_TRCP1_1
8:13
DSGVDT
BTRC
0.924
More...
Q9UQ26
Regulating synaptic membrane exocytosis protein 2
DEG_SCF_TRCP1_1
622:627
DSGVDT
BTRC
0.9851
More...