DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
CPH
CGC
Degron:
DSYTSRP
Uniprot ID:
O00305
Source protein:
Voltage-dependent L-type calcium channel subunit beta-4
Source gene:
CACNB4
Class:
CBL_PTK
Location:
53:59
E3 ligase:
CBL
DEGRON score:
0.9936
ASA_SCORE:
73.3
COIL:
0.7251
CONS_SCORE:
0.4959
DSS_SCORE:
0.6195
HELIX:
0.0459
FCONS_SCORE:
1.1957
RIG_SCORE:
0.6061
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.D69N
TCGA-D3-A3MR
SKCM
TCGA
DSYTSRP
CBL_PTK
0.0556
p.P59S
TCGA-DA-A1HV
SKCM
TCGA
DSYTSRP
CBL_PTK
0.6752
p.S57R
TCGA-DX-A6YS
SARC
TCGA
DSYTSRP
CBL_PTK
0.6316
p.A54E
DO229029
LICA
ICGC
DSYTSRP
CBL_PTK
0.7701
p.D51N
DO47256
SKCM
ICGC
DSYTSRP
CBL_PTK
0.2778
p.R52W
DO38567
STAD
ICGC
DSYTSRP
CBL_PTK
0.3056
p.A64S
DO41999
UCEC
ICGC
DSYTSRP
CBL_PTK
0.1944
p.V64A
SIDM01059
Melanoma
GDSC
DSYTSRP
CBL_PTK
0.1944
p.V64A
IPC-298
skin
COSMIC
DSYTSRP
CBL_PTK
0.1944
p.D63N
SIDM01664
Prostate Carcinoma
GDSC
DSYTSRP
CBL_PTK
0.2222
p.A59T
ACH-000993
Endometrial/Uterine Cancer
CCLE
DSYTSRP
CBL_PTK
0.7139
p.D61E
ACH-001127
Leukemia
CCLE
DSYTSRP
CBL_PTK
0.2778
p.D61E
MOLT-4
haematopoietic_and_lymphoid_tissue
COSMIC
DSYTSRP
CBL_PTK
0.2778
p.V46A
IPC-298
skin
COSMIC
DSYTSRP
CBL_PTK
0.1389
p.D60Y
Mewo
skin
COSMIC
DSYTSRP
CBL_PTK
0.3056
p.Y57C
JHH-7
liver
COSMIC
DSYTSRP
CBL_PTK
0.7087
Drug responses associated with CACNB4 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of DSYTSRP
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
O00305
Voltage-dependent L-type calcium channel subunit beta-4
CBL_PTK
53:59
DSYTSRP
CBL
0.9936
More...
P54284
Voltage-dependent L-type calcium channel subunit beta-3
CBL_PTK
19:25
DSYTSRP
CBL
0.9665
More...
Q08289
Voltage-dependent L-type calcium channel subunit beta-2
CBL_PTK
75:81
DSYTSRP
CBL
0.9882
More...