DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
ERRELGFVQ
Uniprot ID:
Q9NYA3
Source protein:
Golgin subfamily A member 6A
Source gene:
GOLGA6A
Class:
DEG_APCC_DBOX_1
Location:
549:557
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.8992
ASA_SCORE:
111.7
COIL:
0.4927
CONS_SCORE:
0.5899
DSS_SCORE:
0.6065
HELIX:
0.4953
FCONS_SCORE:
1.0546
RIG_SCORE:
0.7649
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.A542V
TCGA-A5-A1OF
UCEC
TCGA
ERRELGFVQ
DEG_APCC_DBOX_1
0.1389
p.A542V
DO42568
UCEC
ICGC
ERRELGFVQ
DEG_APCC_DBOX_1
0.1389
p.T545M
TCGA-D5-6532
COAD
TCGA
ERRELGFVQ
DEG_APCC_DBOX_1
0.2222
p.T545M
DO7890
COAD
ICGC
ERRELGFVQ
DEG_APCC_DBOX_1
0.2222
p.T545M
ACH-000988
Endometrial/Uterine Cancer
CCLE
ERRELGFVQ
DEG_APCC_DBOX_1
0.2222
p.G564S
DO222610
COCA
ICGC
ERRELGFVQ
DEG_APCC_DBOX_1
0.1389
p.V556I
SIDM02039
Colorectal Carcinoma
GDSC
ERRELGFVQ
DEG_APCC_DBOX_1
0.5965
p.R551Q
ACH-000334
Lymphoma
CCLE
ERRELGFVQ
DEG_APCC_DBOX_1
0.6218
p.P558A
ACH-000616
Gastric Cancer
CCLE
ERRELGFVQ
DEG_APCC_DBOX_1
0.3056
Drug responses associated with GOLGA6A mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of ERRELGFVQ
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q9NYA3
Golgin subfamily A member 6A
DEG_APCC_DBOX_1
549:557
ERRELGFVQ
APC,CDC20,FZR1
0.8992
More...
A6NDN3
Golgin subfamily A member 6B
DEG_APCC_DBOX_1
549:557
ERRELGFVQ
APC,CDC20,FZR1
0.732
More...
A6NDK9
Golgin subfamily A member 6C
DEG_APCC_DBOX_1
549:557
ERRELGFVQ
APC,CDC20,FZR1
0.7385
More...
P0CG33
Golgin subfamily A member 6D
DEG_APCC_DBOX_1
549:557
ERRELGFVQ
APC,CDC20,FZR1
0.8495
More...