DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
GKENE
Uniprot ID:
O94985
Source protein:
Calsyntenin-1
Source gene:
CLSTN1
Class:
DEG_APCC_KENBOX_2
Location:
896:900
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.6765
ASA_SCORE:
99.38
COIL:
0.7132
CONS_SCORE:
0.3922
DSS_SCORE:
0.5841
HELIX:
0.2518
FCONS_SCORE:
0.7743
RIG_SCORE:
0.6928
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.P895H
DO47578
SKCM
ICGC
GKENE
DEG_APCC_KENBOX_2
0.3056
p.G896W
SIDM00518
Mesothelioma
GDSC
GKENE
DEG_APCC_KENBOX_2
0.6714
p.G896W
ACH-002136
Lung Cancer
CCLE
GKENE
DEG_APCC_KENBOX_2
0.6714
p.G896W
H290
pleura
COSMIC
GKENE
DEG_APCC_KENBOX_2
0.6714
p.V902I
EN
endometrium
COSMIC
GKENE
DEG_APCC_KENBOX_2
0.2778
p.G886W
H290
pleura
COSMIC
GKENE
DEG_APCC_KENBOX_2
0.0556
Drug responses associated with CLSTN1 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of GKENE
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
O94985
Calsyntenin-1
DEG_APCC_KENBOX_2
896:900
GKENE
APC,CDC20,FZR1
0.6765
More...
Q9H2Y7
Zinc finger protein 106
DEG_APCC_KENBOX_2
883:887
GKENE
APC,CDC20,FZR1
0.9667
More...
Q9NQW8
Cyclic nucleotide-gated cation channel beta-3
DEG_APCC_KENBOX_2
734:738
GKENE
APC,CDC20,FZR1
0.7023
More...