DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
GKENE
Uniprot ID:
Q9NQW8
Source protein:
Cyclic nucleotide-gated cation channel beta-3
Source gene:
CNGB3
Class:
DEG_APCC_KENBOX_2
Location:
734:738
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.7023
ASA_SCORE:
109.58
COIL:
0.761
CONS_SCORE:
0.5158
DSS_SCORE:
0.7167
HELIX:
0.2242
FCONS_SCORE:
1.0421
RIG_SCORE:
0.5565
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.E736Q
TCGA-33-4532
LUSC
TCGA
GKENE
DEG_APCC_KENBOX_2
0.6744
p.E736Q
DO26626
LUSC
ICGC
GKENE
DEG_APCC_KENBOX_2
0.6744
p.G734V
TCGA-36-2545
OV
TCGA
GKENE
DEG_APCC_KENBOX_2
0.6421
p.G734V
DO28015
OV
ICGC
GKENE
DEG_APCC_KENBOX_2
0.6421
p.P746Q
TCGA-37-4135
LUSC
TCGA
GKENE
DEG_APCC_KENBOX_2
0.1111
p.P746Q
DO229028
LICA
ICGC
GKENE
DEG_APCC_KENBOX_2
0.1111
p.P746Q
DO26806
LUSC
ICGC
GKENE
DEG_APCC_KENBOX_2
0.1111
p.E729Q
TCGA-78-7156
LUAD
TCGA
GKENE
DEG_APCC_KENBOX_2
0.1944
p.E729Q
TCGA-GV-A3QF
BLCA
TCGA
GKENE
DEG_APCC_KENBOX_2
0.1944
p.E729Q
DO471
BLCA
ICGC
GKENE
DEG_APCC_KENBOX_2
0.1944
p.E729Q
DO23720
LUAD
ICGC
GKENE
DEG_APCC_KENBOX_2
0.1944
p.D739Y
TCGA-AA-A010
COAD
TCGA
GKENE
DEG_APCC_KENBOX_2
0.3056
p.K742N
TCGA-BP-4993
KIRC
TCGA
GKENE
DEG_APCC_KENBOX_2
0.3333
p.K742N
DO20171
KIRC
ICGC
GKENE
DEG_APCC_KENBOX_2
0.3333
p.E738K
TCGA-D3-A8GQ
SKCM
TCGA
GKENE
DEG_APCC_KENBOX_2
0.591
p.E738K
DO51246
SKCM
ICGC
GKENE
DEG_APCC_KENBOX_2
0.591
p.Q727E
DO14232
HNSC
ICGC
GKENE
DEG_APCC_KENBOX_2
0.1389
p.Q727E
DO231221
THCA
ICGC
GKENE
DEG_APCC_KENBOX_2
0.1389
p.Q727E
SIDM01151
Hepatocellular Carcinoma
GDSC
GKENE
DEG_APCC_KENBOX_2
0.1389
p.Q727E
SIDM00807
Bladder Carcinoma
GDSC
GKENE
DEG_APCC_KENBOX_2
0.1389
p.Q727E
ACH-000483
Liver Cancer
CCLE
GKENE
DEG_APCC_KENBOX_2
0.1389
p.Q727E
ACH-001484
Leukemia
CCLE
GKENE
DEG_APCC_KENBOX_2
0.1389
p.Q727E
SNU-182
liver
COSMIC
GKENE
DEG_APCC_KENBOX_2
0.1389
p.Q727E
5637
urinary_tract
COSMIC
GKENE
DEG_APCC_KENBOX_2
0.1389
p.Q727R
DO14232
HNSC
ICGC
GKENE
DEG_APCC_KENBOX_2
0.1389
p.Q727R
DO231221
THCA
ICGC
GKENE
DEG_APCC_KENBOX_2
0.1389
p.Q727R
SIDM01151
Hepatocellular Carcinoma
GDSC
GKENE
DEG_APCC_KENBOX_2
0.1389
p.Q727R
SIDM00807
Bladder Carcinoma
GDSC
GKENE
DEG_APCC_KENBOX_2
0.1389
p.Q727R
ACH-000483
Liver Cancer
CCLE
GKENE
DEG_APCC_KENBOX_2
0.1389
p.Q727R
ACH-001484
Leukemia
CCLE
GKENE
DEG_APCC_KENBOX_2
0.1389
p.Q727R
SNU-182
liver
COSMIC
GKENE
DEG_APCC_KENBOX_2
0.1389
p.Q727R
5637
urinary_tract
COSMIC
GKENE
DEG_APCC_KENBOX_2
0.1389
p.D741G
DO231987
LICA
ICGC
GKENE
DEG_APCC_KENBOX_2
0.25
p.G743E
DO220878
MELA
ICGC
GKENE
DEG_APCC_KENBOX_2
0.1944
p.G743E
DO222578
MELA
ICGC
GKENE
DEG_APCC_KENBOX_2
0.1944
p.E731K
DO220877
MELA
ICGC
GKENE
DEG_APCC_KENBOX_2
0.25
p.E748Q
SIDM00133
Non-Small Cell Lung Carcinoma
GDSC
GKENE
DEG_APCC_KENBOX_2
0.0556
p.E748Q
ACH-000861
Lung Cancer
CCLE
GKENE
DEG_APCC_KENBOX_2
0.0556
p.E748Q
HOP-62
lung
COSMIC
GKENE
DEG_APCC_KENBOX_2
0.0556
p.G734R
SIDM01147
Gastric Carcinoma
GDSC
GKENE
DEG_APCC_KENBOX_2
0.6457
p.G734R
ACH-000427
Gastric Cancer
CCLE
GKENE
DEG_APCC_KENBOX_2
0.6457
p.G734R
NCI-N87
stomach
COSMIC
GKENE
DEG_APCC_KENBOX_2
0.6457
Drug responses associated with CNGB3 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of GKENE
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
O94985
Calsyntenin-1
DEG_APCC_KENBOX_2
896:900
GKENE
APC,CDC20,FZR1
0.6765
More...
Q9H2Y7
Zinc finger protein 106
DEG_APCC_KENBOX_2
883:887
GKENE
APC,CDC20,FZR1
0.9667
More...
Q9NQW8
Cyclic nucleotide-gated cation channel beta-3
DEG_APCC_KENBOX_2
734:738
GKENE
APC,CDC20,FZR1
0.7023
More...