DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
GKENN
Uniprot ID:
Q3YBR2
Source protein:
Transforming growth factor beta regulator 1
Source gene:
TBRG1
Class:
DEG_APCC_KENBOX_2
Location:
144:148
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.8614
ASA_SCORE:
99.12
COIL:
0.6236
CONS_SCORE:
0.5557
DSS_SCORE:
0.5469
HELIX:
0.3632
FCONS_SCORE:
1.0227
RIG_SCORE:
0.6834
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.L150M
TCGA-AP-A051
UCEC
TCGA
GKENN
DEG_APCC_KENBOX_2
0.2778
p.L150M
DO42673
UCEC
ICGC
GKENN
DEG_APCC_KENBOX_2
0.2778
p.K145N
TCGA-DF-A2KN
UCEC
TCGA
GKENN
DEG_APCC_KENBOX_2
0.6918
p.K145N
DO223282
UCEC
ICGC
GKENN
DEG_APCC_KENBOX_2
0.6918
p.C157R
TCGA-JX-A3Q8
CESC
TCGA
GKENN
DEG_APCC_KENBOX_2
0.0833
p.C157R
DO51608
CESC
ICGC
GKENN
DEG_APCC_KENBOX_2
0.0833
p.K140R
DO230334
COCA
ICGC
GKENN
DEG_APCC_KENBOX_2
0.3333
p.C157S
ACH-000037
Sarcoma
CCLE
GKENN
DEG_APCC_KENBOX_2
0.0833
Drug responses associated with TBRG1 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of GKENN
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q3YBR2
Transforming growth factor beta regulator 1
DEG_APCC_KENBOX_2
144:148
GKENN
APC,CDC20,FZR1
0.8614
More...
Q9H2G2
STE20-like serine/threonine-protein kinase
DEG_APCC_KENBOX_2
450:454
GKENN
APC,CDC20,FZR1
0.995
More...
Q5HYR2
Doublesex- and mab-3-related transcription factor C1
DEG_APCC_KENBOX_2
23:27
GKENN
APC,CDC20,FZR1
0.5204
More...