DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
GKENN
Uniprot ID:
Q9H2G2
Source protein:
STE20-like serine/threonine-protein kinase
Source gene:
SLK
Class:
DEG_APCC_KENBOX_2
Location:
450:454
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.995
ASA_SCORE:
104.32
COIL:
0.7796
CONS_SCORE:
0.2917
DSS_SCORE:
0.4834
HELIX:
0.1604
FCONS_SCORE:
1.0499
RIG_SCORE:
0.6969
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.I457L
TCGA-4R-AA8I
LIHC
TCGA
GKENN
DEG_APCC_KENBOX_2
0.25
p.I457L
DO49657
LIHC
ICGC
GKENN
DEG_APCC_KENBOX_2
0.25
p.N454Y
TCGA-BH-A0DK
BRCA
TCGA
GKENN
DEG_APCC_KENBOX_2
0.5948
p.N454Y
DO1305
BRCA
ICGC
GKENN
DEG_APCC_KENBOX_2
0.5948
p.M456T
TCGA-BS-A0UJ
UCEC
TCGA
GKENN
DEG_APCC_KENBOX_2
0.2778
p.M456T
DO42745
UCEC
ICGC
GKENN
DEG_APCC_KENBOX_2
0.2778
p.I444N
DO52656
MALY
ICGC
GKENN
DEG_APCC_KENBOX_2
0.1667
Drug responses associated with SLK mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of GKENN
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q3YBR2
Transforming growth factor beta regulator 1
DEG_APCC_KENBOX_2
144:148
GKENN
APC,CDC20,FZR1
0.8614
More...
Q9H2G2
STE20-like serine/threonine-protein kinase
DEG_APCC_KENBOX_2
450:454
GKENN
APC,CDC20,FZR1
0.995
More...
Q5HYR2
Doublesex- and mab-3-related transcription factor C1
DEG_APCC_KENBOX_2
23:27
GKENN
APC,CDC20,FZR1
0.5204
More...